RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ADSLP30566 484 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 BUD31P41223 144 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 RPP38P78345 283 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 TNFRSF17Q02223 184 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 ID2Q02363 134 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 PCDH1Q08174 1060 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 PRAMEF9Q5VWM5 478 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 KHDRBS2Q5VWX1 349 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 SHEQ5VZ18 495 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 VASNQ6EMK4 673 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 OR4C11Q6IEV9 310 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 LRRC70Q7Z2Q7 622 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 GPR180Q86V85 440 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 ZCCHC7Q8N3Z6 543 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 DIO2Q92813 273 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 TP53INP1Q96A56 240 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 NTNG2Q96CW9 530 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 GAL3ST4Q96RP7 486 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 MCMBPQ9BTE3 642 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 WWTR1Q9GZV5 400 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 DDX47Q9H0S4 455 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 PLEKHF2Q9H8W4 249 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 PRM3Q9NNZ6 103 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 SNX15Q9NRS6 342 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 CD274Q9NZQ7 290 aa14.45□□□□□ -0.1
HERPUD1-215ENST00000568676 MBD3L4A6NDZ8 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 MBD3L3A6NE82 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 MBD3L5A6NJ08 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 CLCA1A8K7I4 914 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 RTCAO00442 366 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 WISP3O95389 354 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 INHBBP09529 407 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 TRPC1P48995 793 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 ZNF136P52737 540 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 SLC37A1P57057 533 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 SLAMF1Q13291 335 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 EBPQ15125 230 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 RPS6KA2Q15349 733 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 DEPDC1Q5TB30 811 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 PACS2Q86VP3 889 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 WFDC11Q8NEX6 87 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 MBD3L2Q8NHZ7 208 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 RGMAQ96B86 450 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 WDR83Q9BRX9 315 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 YIPF4Q9BSR8 244 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 CD244Q9BZW8 370 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 JKAMPQ9P055 326 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 TSC22D4Q9Y3Q8 395 aa14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 FLNAP21333 2647 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-215ENST00000568676 A0A1B0GTL3 188 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ARHGEF9O43307 516 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 OR10H2O60403 315 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CCNT2O60583 730 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 GPR75O95800 540 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 TGFB1P01137 390 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CCDC166P0CW27 439 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CD1DP15813 335 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 PIK3CBP42338 1070 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CDK9P50750 372 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 RAP1GDS1P52306 607 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 DCAF7P61962 342 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 HERVK_113P63132 956 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ERVK-8P63133 956 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CBLBQ13191 982 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 RCAN2Q14206 197 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 SCIMPQ6UWF3 145 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 OR4N5Q8IXE1 308 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 FBXO36Q8NEA4 188 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 OR7G3Q8NG95 312 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 SMPDL3BQ92485 455 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 CDKL2Q92772 493 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 RIT1Q92963 219 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ISL2Q96A47 359 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 PPWD1Q96BP3 646 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ZFP3Q96NJ6 502 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 DACH2Q96NX9 599 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ERVK-6Q9BXR3 956 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ANGPTL4Q9BY76 406 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 UBQLN3Q9H347 655 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 WDR41Q9HAD4 459 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 LYARQ9NX58 379 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 TXNDC16Q9P2K2 825 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 FETUBQ9UGM5 382 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 SNX12Q9UMY4 172 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 ERVK-19Q9WJR5 959 aa14.43□□□□□ -0.1
HERPUD1-215ENST00000568676 C2orf92A0A1B0GVN3 265 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 E7ESA3 106 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 HRKO00198 91 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 TRAPPC6AO75865 159 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 PCNAP12004 261 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 STMN1P16949 149 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 EPORP19235 508 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 GCKP35557 465 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 MASP1P48740 699 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 NRG3P56975 720 aa14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 EEF1A1P68104 462 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-215ENST00000568676 PHEXP78562 749 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms