RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ARL4DP49703 201 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CRYBA2P53672 197 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 WDR53Q7Z5U6 358 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 HMGN2P46Q86SG4 172 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 TTC29Q8NA56 475 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR4K14Q8NGD5 310 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 LZICQ8WZA0 190 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ZDHHC12Q96GR4 267 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 TCTN2Q96GX1 697 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 TMEM19Q96HH6 336 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 NR1H4Q96RI1 486 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 DOHHQ9BU89 302 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 TWSG1Q9GZX9 223 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR51I1Q9H343 314 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SMURF2Q9HAU4 748 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 IL1RAPQ9NPH3 570 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 MS4A12Q9NXJ0 267 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 UBAP1Q9NZ09 502 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 KCMF1Q9P0J7 381 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CES1P1Q9UKY3 287 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ASCC3Q8N3C0 2202 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 EME2A4GXA9 379 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 UPK1AO00322 258 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 HMGN4O00479 90 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CASC3O15234 703 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 DENRO43583 198 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 GCM2O75603 506 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 SNAP29O95721 258 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SMIM10L1P0DMW3 83 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ARAFP10398 606 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ARHGDIAP52565 204 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ARSFP54793 590 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SELENOWP63302 87 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 PRR5P85299 388 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 KCNAB1Q14722 419 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 C6orf132Q5T0Z8 1188 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR2T5Q6IEZ7 315 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR52E8Q6IFG1 317 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 REEP3Q6NUK4 255 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 BHLHB9Q6PI77 547 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CEP68Q76N32 757 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OLIG3Q7RTU3 272 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SPRED1Q7Z699 444 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SLC35F3Q8IY50 421 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 LRRC25Q8N386 305 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 ARL10Q8N8L6 244 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR2T29Q8NH02 315 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 KLHL6Q8WZ60 621 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 GATA6Q92908 595 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 POP5Q969H6 163 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 TAMM41Q96BW9 452 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 C16orf58Q96GQ5 468 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SMIM10Q96HG1 83 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 IER2Q9BTL4 223 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ADI1Q9BV57 179 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 EPS8L2Q9H6S3 715 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 C3orf14Q9HBI5 128 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 PDE7BQ9NP56 450 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 DDX18Q9NVP1 670 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 SMPD3Q9NY59 655 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 HCN3Q9P1Z3 774 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SAMHD1Q9Y3Z3 626 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 KLK4Q9Y5K2 254 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 GMEB1Q9Y692 573 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CPED1A4D0V7 1026 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 HS6ST1O60243 411 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 GALR3O60755 368 aaPredicted RBP6.65□□□□□ -1.34
SMG1-215ENST00000568239 IFNA14P01570 189 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 PPP2R1BP30154 601 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 CTSKP43235 329 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 RELAQ04206 551 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 MERTKQ12866 999 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 MLC1Q15049 377 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 SYPL1Q16563 259 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 GPAT3Q53EU6 434 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 NHSL2Q5HYW2 709 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 PMS2CLQ68D20 193 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 TMEM179BQ7Z7N9 219 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 C1orf210Q8IVY1 113 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 PACRGLQ8N7B6 248 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 ELP4Q96EB1 424 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 RNF31Q96EP0 1072 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 ZNF764Q96H86 408 aaPredicted RBP6.65□□□□□ -1.34
SMG1-215ENST00000568239 SERHL2Q9H4I8 314 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 SYNDIG1Q9H7V2 258 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 CAPN10Q9HC96 672 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 P2RX2Q9UBL9 471 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 SLC22A7Q9Y694 548 aa6.65□□□□□ -1.34
SMG1-215ENST00000568239 CCDC163A0A0D9SF12 145 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 TLCD2A6NGC4 264 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 EMC8O43402 210 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 SRPX2O60687 465 aaPredicted RBP6.65□□□□□ -1.35
SMG1-215ENST00000568239 PGM3O95394 542 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 ALBP02768 609 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 FHP07954 510 aa6.65□□□□□ -1.35
SMG1-215ENST00000568239 GNAO1P09471 354 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms