RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 CEP85LQ5SZL2 805 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 SPINK14Q6IE38 97 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 SCIMPQ6UWF3 145 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 HSDL2Q6YN16 418 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 C16orf47Q6ZP98 133 aaPredicted RBP11.4□□□□□ -0.58
FANCA-229ENST00000567988 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 ZNF615Q8N8J6 731 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 CCDC63Q8NA47 563 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 FAM76AQ8TAV0 307 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 NUBPLQ8TB37 319 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 GRHL3Q8TE85 626 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 FAR1Q8WVX9 515 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 CNRIP1Q96F85 164 aaPredicted RBP11.4□□□□□ -0.58
FANCA-229ENST00000567988 DGAT2Q96PD7 388 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 OR8D2Q9GZM6 311 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 MAP10Q9P2G4 905 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 HAO1Q9UJM8 370 aa11.4□□□□□ -0.58
FANCA-229ENST00000567988 COPG1Q9Y678 874 aaKnown RBP11.4□□□□□ -0.58
FANCA-229ENST00000567988 TM9SF1O15321 606 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 PCDH7O60245 1069 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 NME2P1O60361 137 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 ITGA10O75578 1167 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 WISP2O76076 250 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 IL3P08700 152 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 DRD2P14416 443 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 NME2P22392 152 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 GSTM5P46439 218 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 EBPQ15125 230 aaKnown RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 MPEG1Q2M385 716 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 PRICKLE4Q2TBC4 344 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 FAM71E1Q6IPT2 247 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 SIAH3Q8IW03 269 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 OR4K14Q8NGD5 310 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 SUN3Q8TAQ9 357 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 C16orf78Q8WTQ4 265 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 NTNG2Q96CW9 530 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 ZNF764Q96H86 408 aaPredicted RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 RASL10BQ96S79 203 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 UTP23Q9BRU9 249 aaKnown RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 SHCBP1LQ9BZQ2 653 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 C20orf27Q9GZN8 174 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 CLMPQ9H6B4 373 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 WDR41Q9HAD4 459 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 RRAGDQ9NQL2 400 aaPredicted RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 ANKRD10Q9NXR5 420 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 TAS2R7Q9NYW3 318 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 EHD3Q9NZN3 535 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 ABI3Q9P2A4 366 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 DLGAP4Q9Y2H0 992 aa11.39□□□□□ -0.59
FANCA-229ENST00000567988 YARS2Q9Y2Z4 477 aaKnown RBP11.39□□□□□ -0.59
FANCA-229ENST00000567988 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 LSM1O15116 133 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 BIRC5O15392 142 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 GUCY1B2O75343 617 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 SLC25A12O75746 678 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 OR2J2O76002 312 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 SP1P08047 785 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 COX7A2P14406 83 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 PORP16435 677 aaPredicted RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 GNLYP22749 145 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 TACR1P25103 407 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 MST1P26927 711 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 CYB561P49447 251 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 XKP51811 444 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 SLC18A1P54219 525 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 WDR4P57081 412 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 ERVK-8P63133 956 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 KCNC4Q03721 635 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ACSM2AQ08AH3 577 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ASPHQ12797 758 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 PIGGQ5H8A4 983 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ACSM2BQ68CK6 577 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 MDGA2Q7Z553 956 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ZNF675Q8TD23 568 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 NR4A3Q92570 626 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 RIT1Q92963 219 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 RBM18Q96H35 190 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 FRMD6Q96NE9 622 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.38□□□□□ -0.59
FANCA-229ENST00000567988 LIN28AQ9H9Z2 209 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 MYNNQ9NPC7 610 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 RYDENQ9NUL5 291 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 MAT2BQ9NZL9 334 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 LRFN1Q9P244 771 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ZDHHC2Q9UIJ5 367 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 ERVK-19Q9WJR5 959 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 WBP11Q9Y2W2 641 aaKnown RBP11.38□□□□□ -0.59
FANCA-229ENST00000567988 TRAF6Q9Y4K3 522 aa11.38□□□□□ -0.59
FANCA-229ENST00000567988 OR6C76A6NM76 312 aa11.37□□□□□ -0.59
FANCA-229ENST00000567988 FCHO1O14526 889 aa11.37□□□□□ -0.59
FANCA-229ENST00000567988 ITM2AO43736 263 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms