RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 A0A0A6YYD5 115 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 A0A1W2PR48 441 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 HRKO00198 91 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 OR10H2O60403 315 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CELA3AP09093 270 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 FAM58BPP0C7Q3 252 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 SLC35E2P0CK97 266 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 GFAPP14136 432 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CD1EP15812 388 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 SLC37A1P57057 533 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 HERVK_113P63132 956 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ERVK-8P63133 956 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 KCNJ2P63252 427 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 C2orf54Q08AI8 447 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ZNF267Q14586 743 aaPredicted RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 NTRK2Q16620 822 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 KLC3Q6P597 504 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ZDHHC24Q6UX98 284 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CCDC25Q86WR0 208 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 MYLK4Q86YV6 388 aaPredicted RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 TAGAPQ8N103 731 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 RNF175Q8N4F7 328 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ZNF717Q9BY31 904 aaPredicted RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 WWTR1Q9GZV5 400 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ZNF703Q9H7S9 590 aaPredicted RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 IPPKQ9H8X2 491 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 B4GALT7Q9UBV7 327 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
RNF40-209ENST00000566703 CHCHD2Q9Y6H1 151 aaPredicted RBP13.8□□□□□ -0.2
RNF40-209ENST00000566703 ZNF407Q9C0G0 2248 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 AHRRA9YTQ3 701 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 TMPRSS11DO60235 418 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 EEDO75530 441 aaKnown RBP13.79□□□□□ -0.2
RNF40-209ENST00000566703 SEMA3DO95025 777 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 KLHL2O95198 593 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 NR2F6P10588 404 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 ENDOUP21128 410 aaKnown RBP13.79□□□□□ -0.2
RNF40-209ENST00000566703 ADH7P40394 386 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 GTF2H2Q13888 395 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 EBPQ15125 230 aaKnown RBP13.79□□□□□ -0.2
RNF40-209ENST00000566703 CPSF6Q16630 551 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNF40-209ENST00000566703 C10orf62Q5T681 223 aaPredicted RBP13.79□□□□□ -0.2
RNF40-209ENST00000566703 MROH9Q5TGP6 573 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 TMEM198Q66K66 360 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 GTF2H2CQ6P1K8 395 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 LIX1LQ8IVB5 337 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 OR10G3Q8NGC4 313 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 NEIL3Q8TAT5 605 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 SECISBP2Q96T21 854 aaKnown RBP13.79□□□□□ -0.2
RNF40-209ENST00000566703 SERPINI1Q99574 410 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 SNX15Q9NRS6 342 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 ALKBH4Q9NXW9 302 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 SPRR3Q9UBC9 169 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 HCFC1P51610 2035 aa13.79□□□□□ -0.2
RNF40-209ENST00000566703 A0A096LPK6 155 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 C2orf92A0A1B0GVN3 265 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 HMX2A2RU54 273 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 LRRC3CA6NJW4 275 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 HSPB2A8KAH6 182 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 SYT5O00445 386 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 TP53I11O14683 189 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 SNX4O95219 450 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 CLDN9O95484 217 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 RFPL3SP0C7P2 107 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 TYK2P29597 1187 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 CASQ1P31415 396 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 DLX5P56178 289 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 MYBPHQ13203 477 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■□ 21.5
RNF40-209ENST00000566703 TRADDQ15628 312 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 HSPB2Q16082 182 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 PRAMEF20Q5VT98 475 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
RNF40-209ENST00000566703 GOLGA7Q7Z5G4 137 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 NUDT13Q86X67 352 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 FAM13CQ8NE31 585 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 GPR78Q96P69 363 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 DOHHQ9BU89 302 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 NTMT1Q9BV86 223 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 CXorf21Q9HAI6 301 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 ADAM29Q9UKF5 820 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 TMCO1Q9UM00 188 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 RNF11Q9Y3C5 154 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 L3MBTL1Q9Y468 752 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 OTOGQ6ZRI0 2925 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 DNAJC13O75165 2243 aa13.78□□□□□ -0.2
RNF40-209ENST00000566703 WASHC1A8K0Z3 465 aa13.77□□□□□ -0.21
RNF40-209ENST00000566703 CDH16O75309 829 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms