RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MAD1L1Q9Y6D9 718 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 KIF26AQ9ULI4 1882 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 DOCK7Q96N67 2140 aa3.96□□□□□ -1.77
LINC00561-201ENST00000565815 URADA6NGE7 173 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 F8VP50 259 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 SLC9A3R1O14745 358 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 FLRT2O43155 660 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 TNFAIP8O95379 198 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 C1QAP02745 245 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 TNFRSF4P43489 277 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ZP1P60852 638 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 BASP1P80723 227 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 RFTN1Q14699 578 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CHI3L2Q15782 390 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CCDC14Q49A88 953 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 KCNT1Q5JUK3 1230 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 RABGAP1LQ5R372 815 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 OGFRL1Q5TC84 451 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ANKRD22Q5VYY1 191 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 C1QL2Q7Z5L3 287 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 PRUNE1Q86TP1 453 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NRROSQ86YC3 692 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ARID3BQ8IVW6 561 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 PCDH20Q8N6Y1 951 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 OR5R1Q8NH85 324 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 RDH11Q8TC12 318 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 SPATA18Q8TC71 538 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NAT14Q8WUY8 206 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CNDP1Q96KN2 507 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 PANX3Q96QZ0 392 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 EBNA1BP2Q99848 306 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 HRH4Q9H3N8 390 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 C8orf4Q9NR00 106 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 FBXO6Q9NRD1 293 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CISHQ9NSE2 258 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 SLC7A8Q9UHI5 535 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CHMP2BQ9UQN3 213 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 MAU2Q9Y6X3 613 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 TPRP12270 2363 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 EP300Q09472 2414 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 MAP1BP46821 2468 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NOTCH4Q99466 2003 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 KPNA7A9QM74 516 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 INO80B-WBP1J3KQ70 363 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 M0QZ24 198 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 YKT6O15498 198 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 HS6ST1O60243 411 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NDUFS3O75489 264 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CH25HO95992 272 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 SRPRAP08240 638 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ACAA1P09110 424 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 THRAP10827 490 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 VDRP11473 427 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CD59P13987 128 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ETS1P14921 441 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NAGAP17050 411 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 BDKRB2P30411 391 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NUMBP49757 651 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 AQP5P55064 265 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ISL1P61371 349 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ADORA2A-AS1P86434 159 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 OGDHQ02218 1023 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 MBTD1Q05BQ5 628 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 TWF1Q12792 350 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 OVGP1Q12889 678 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 TEAD2Q15562 447 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF699Q32M78 642 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 XKR4Q5GH76 650 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 Q6ZS52 159 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CROCCP3Q8IVE0 287 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NAXDQ8IW45 347 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 UNC45BQ8IWX7 931 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 FBXW8Q8N3Y1 598 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF843Q8N446 348 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 B4GALNT2Q8NHY0 566 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 HM13Q8TCT9 377 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 PSMG2Q969U7 264 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 LINC00615Q96LM1 132 aaPredicted RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 RILPQ96NA2 401 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CATSPER2Q96P56 530 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 RNF157Q96PX1 679 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NDNQ99608 321 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 THTPAQ9BU02 230 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 FZD8Q9H461 694 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 C1RLQ9NZP8 487 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 FZD10Q9ULW2 581 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.96□□□□□ -1.78
LINC00561-201ENST00000565815 CEP250Q9BV73 2442 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 PRUNE2Q8WUY3 3088 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 NCOR2Q9Y618 2525 aa3.96□□□□□ -1.78
LINC00561-201ENST00000565815 VWA8A3KMH1 1905 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 SPAARA0A1B0GVQ0 90 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 H7C0C1 242 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF701M0R085 212 aaPredicted RBP3.95□□□□□ -1.78
LINC00561-201ENST00000565815 PAPSS1O43252 624 aaPredicted RBP3.95□□□□□ -1.78
LINC00561-201ENST00000565815 PRPSAP2O60256 369 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 B3GAT3O94766 335 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 HLA-EP13747 358 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 KCNE1P15382 129 aa3.95□□□□□ -1.78
LINC00561-201ENST00000565815 ARF4P18085 180 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms