RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CCDC88CQ9P219 2028 aa5.92□□□□□ -1.46
TCF4-228ENST00000565393 SHANK1Q9Y566 2161 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 A0A087WUV0 522 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 OR14I1A6ND48 311 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 OR6C76A6NM76 312 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 FIGNL2A6NMB9 653 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TRIM49D1C9J1S8 452 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TP53I11O14683 189 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SUSD5O60279 629 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 ERAL1O75616 437 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 GLSO94925 669 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 LRATO95237 230 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 ESRRBO95718 433 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 AIFM1O95831 613 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 IGKV3-11P04433 115 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SNRPAP09012 282 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 CELA3AP09093 270 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 RFPL3SP0C7P2 107 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 CTAGE8P0CG41 777 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 GLI4P10075 376 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 COL6A2P12110 1019 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 PORP16435 677 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 KRT15P19012 456 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TAC1P20366 129 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 CAPN3P20807 821 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SSTR4P31391 388 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 GALNSP34059 522 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 MAPK12P53778 367 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 NRG3P56975 720 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SLC37A1P57057 533 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 IGLV3-21P80748 117 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 FOXO1Q12778 655 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TSNAXIP1Q2TAA8 658 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 GLE1Q53GS7 698 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 TECRLQ5HYJ1 363 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 EMC4Q5J8M3 183 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 UBAP2Q5T6F2 1119 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 B3GNT6Q6ZMB0 384 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 RPS27LQ71UM5 84 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 TRILQ7L0X0 811 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 PACS2Q86VP3 889 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 RELL1Q8IUW5 271 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 CTAGE4Q8IX94 777 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 DND1Q8IYX4 353 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 PRR22Q8IZ63 422 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 CLYBLQ8N0X4 340 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 OR4F6Q8NGB9 312 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 OR10G3Q8NGC4 313 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TRPC4APQ8TEL6 797 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 PAQR8Q8TEZ7 354 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SLC44A1Q8WWI5 657 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SELENOMQ8WWX9 145 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 DIO2Q92813 273 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TP53INP1Q96A56 240 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SPACA9Q96E40 222 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 C14orf79Q96F83 325 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 NSUN5Q96P11 429 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 PAFAH2Q99487 392 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 FMO2Q99518 471 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 MRPL57Q9BQC6 102 aaKnown RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 DOHHQ9BU89 302 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 NTMT1Q9BV86 223 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 BRINP2Q9C0B6 783 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 WWTR1Q9GZV5 400 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 ENKD1Q9H0I2 346 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 OR10A5Q9H207 317 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 ZDHHC11Q9H8X9 412 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 ZFP64Q9NPA5 681 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 PLSCR2Q9NRY7 297 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 XPR1Q9UBH6 696 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 B4GALT7Q9UBV7 327 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 BCAP29Q9UHQ4 241 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 PSME2Q9UL46 239 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 BOKQ9UMX3 212 aaPredicted RBP5.91□□□□□ -1.46
TCF4-228ENST00000565393 SNX6Q9UNH7 406 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 NPFFR2Q9Y5X5 522 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 LIPGQ9Y5X9 500 aa5.91□□□□□ -1.46
TCF4-228ENST00000565393 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 C15orf38-AP3S2A0A0A6YYH1 394 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 A0A1B0GVC2 190 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 C1orf226A1L170 272 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 C2orf72A6NCS6 295 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 GOLGA6L10A6NI86 522 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 FOXO6A8MYZ6 492 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 STX16-NPEPL1H3BU86 382 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 PPP6CO00743 305 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 AQP7O14520 342 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 STX16O14662 325 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 HCN1O60741 890 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 WDR1O75083 606 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 SUPT7LO94864 414 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 TOXO94900 526 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 OR4F21O95013 312 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 SNX4O95219 450 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 NADKO95544 446 aaPredicted RBP5.9□□□□□ -1.46
TCF4-228ENST00000565393 OTCP00480 354 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 PDYNP01213 254 aa5.9□□□□□ -1.46
TCF4-228ENST00000565393 IGHG3P01860 377 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms