RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 C1orf185Q5T7R7 199 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 WLSQ5T9L3 541 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 RIPPLY2Q5TAB7 128 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PRAMEF20Q5VT98 475 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 LIPJQ5W064 366 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 RAPH1Q70E73 1250 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 MAATS1Q7Z4T9 603 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 TBC1D1Q86TI0 1168 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 CLYBLQ8N0X4 340 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF441Q8N8Z8 693 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 OR10G3Q8NGC4 313 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 RHEBL1Q8TAI7 183 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 NEIL3Q8TAT5 605 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 WDR20Q8TBZ3 569 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 SLC22A8Q8TCC7 542 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 FBXO25Q8TCJ0 367 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 FBF1Q8TES7 1133 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 KCTD4Q8WVF5 259 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 RIT1Q92963 219 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 GPR78Q96P69 363 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ERVK-6Q9BXR3 956 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 WWTR1Q9GZV5 400 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 LDAHQ9H6V9 325 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 DDX31Q9H8H2 851 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PSD3Q9NYI0 1048 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 CNIH4Q9P003 139 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PHF11Q9UIL8 331 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 CNOT11Q9UKZ1 510 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ERVK-19Q9WJR5 959 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ACOT9Q9Y305 439 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PCDHGA11Q9Y5H2 935 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 IQANK1A0A1B0GTG1 560 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 A0A1W2PS29 197 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ANKRD33BA6NCL7 494 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 OR6C76A6NM76 312 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SYCE1LA8MT33 242 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 KDM4EB2RXH2 506 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 FOXE1O00358 373 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SYT5O00445 386 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 PGRMC2O15173 223 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 DYRK3O43781 588 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 UGDHO60701 494 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 CTAG2O75638 210 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 LRATO95237 230 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 AIFM1O95831 613 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 FAM58BPP0C7Q3 252 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SLC35E2P0CK97 266 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 GABRA1P14867 456 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 CD1EP15812 388 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SERPINB3P29508 390 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 TLX1P31314 330 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 NEK2P51955 445 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ART1P52961 327 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 IST1P53990 364 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ALDH18A1P54886 795 aaKnown RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 PLTPP55058 493 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 KCNJ2P63252 427 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 NAB1Q13506 487 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 CUL3Q13618 768 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SNTB1Q13884 538 aaKnown RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SLMAPQ14BN4 828 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 PCBP2Q15366 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SLC25A35Q3KQZ1 300 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 FNDC7Q5VTL7 733 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ARSKQ6UWY0 536 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM64Q6YI46 380 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 RNF111Q6ZNA4 994 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM200AQ86VY9 491 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 DND1Q8IYX4 353 aaKnown RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 L3MBTL4Q8NA19 623 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 NAXEQ8NCW5 288 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 FAM13CQ8NE31 585 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ART5Q96L15 291 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 CXXC4Q9H2H0 198 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SLC6A15Q9H2J7 730 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 LIME1Q9H400 295 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ACTR8Q9H981 624 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 CXorf21Q9HAI6 301 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SLC24A3Q9HC58 644 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 QPCTLQ9NXS2 382 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 ALKBH4Q9NXW9 302 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 BOKQ9UMX3 212 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-213ENST00000565173 RNF11Q9Y3C5 154 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 IKBKGQ9Y6K9 419 aa7.88□□□□□ -1.15
CAPN3-213ENST00000565173 A0A087X1B8 175 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CCDC189A1A4V9 331 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 FAM47E-STBD1D6RA91 191 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 OR7A17O14581 309 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 OR10H2O60403 315 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 KRT38O76015 456 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 KLHL2O95198 593 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 SIX3O95343 332 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-213ENST00000565173 GBAP04062 536 aa7.87□□□□□ -1.15
CAPN3-213ENST00000565173 CT62P0C5K7 136 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms