RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TANKQ92844 425 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 MAGED4Q96JG8 741 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 GPR137Q96N19 417 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 RASL10BQ96S79 203 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF382Q96SR6 550 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TEX10Q9NXF1 929 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 MYOTQ9UBF9 498 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 MID2Q9UJV3 735 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PPT2Q9UMR5 302 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PPIEQ9UNP9 301 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ASB4Q9Y574 426 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 LRBAP50851 2863 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 A0A1W2PS29 197 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SYNDIG1LA6NDD5 238 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 WIPF3A6NGB9 483 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 FOXE1O00358 373 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ASNA1O43681 348 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 DYRK3O43781 588 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SLC19A2O60779 497 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 PDYNP01213 254 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ABOP16442 354 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 NAGLUP54802 743 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ASPHQ12797 758 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 LCP2Q13094 533 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 CASP8Q14790 479 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 PCLAFQ15004 111 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 C3AR1Q16581 482 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 C10orf107Q8IVU9 208 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 CDYL2Q8N8U2 506 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SENP5Q96HI0 755 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 GAL3ST4Q96RP7 486 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 DDX31Q9H8H2 851 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 TRIM45Q9H8W5 580 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SSU72Q9NP77 194 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SLC17A7Q9P2U7 560 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 SUCOQ9UBS9 1254 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 TINAGQ9UJW2 476 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 STK38LQ9Y2H1 464 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 ACTL7BQ9Y614 415 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 CENPEQ02224 2701 aa12.64□□□□□ -0.39
VPS9D1-204ENST00000565023 KLRC4-KLRK1H3BQV0 150 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PGRMC2O15173 223 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 HS6ST1O60243 411 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 ZNF354AO60765 605 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PDE9AO76083 593 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 GPR75O95800 540 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 ESRRAP11474 423 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 H2AFXP16104 143 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 HMOX2P30519 316 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PTGER1P34995 402 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 CA7P43166 264 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 ARFIP1P53367 373 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 CASP6P55212 293 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PKNOX1P55347 436 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PLGLB1Q02325 96 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 LIPMQ5VYY2 423 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 GPRIN3Q6ZVF9 776 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 C9orf40Q8IXQ3 194 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 CCNYL1Q8N7R7 359 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PSD4Q8NDX1 1056 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 OR5L2Q8NGL0 311 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 DEPPQ9NTK1 212 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 AHSPQ9NZD4 102 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 CACNA1DQ01668 2161 aa12.63□□□□□ -0.39
VPS9D1-204ENST00000565023 PCNX1Q96RV3 2341 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 PINLYPA6NC86 204 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 FAM166BA8MTA8 275 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 H3BQF6 201 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 UBFD1O14562 309 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 TRIM13O60858 407 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 SEMA3DO95025 777 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 ESRRBO95718 433 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 MYZAPP0CAP1 466 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 PIK3R1P27986 724 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 ETV4P43268 484 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 MAPK12P53778 367 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 KRTCAP3Q53RY4 240 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 OR52E8Q6IFG1 317 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 SCIMPQ6UWF3 145 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms