RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 NPIPA3F8WFD2 350 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 G3V3Y1 287 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 FGF17O60258 216 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 OTCP00480 354 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 IGHG3P01860 377 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 IGFBP2P18065 325 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 TAC1P20366 129 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 IGLV3-21P80748 117 aaPredicted RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 TLE4Q04727 773 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 PMPCAQ10713 525 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 IFT88Q13099 833 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 MPEG1Q2M385 716 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 GGTA1PQ4G0N0 100 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 C10orf62Q5T681 223 aaPredicted RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 FRG2Q64ET8 278 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 OPN5Q6U736 354 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 GK5Q6ZS86 529 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 LCA5Q86VQ0 697 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 OR4F6Q8NGB9 312 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 SENP5Q96HI0 755 aaPredicted RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 DGAT2Q96PD7 388 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 FRG2BQ96QU4 278 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 ZNF717Q9BY31 904 aaPredicted RBP17.09■□□□□ 0.33
CLN6-204ENST00000564752 IL1RL2Q9HB29 575 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 MCCC2Q9HCC0 563 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
CLN6-204ENST00000564752 A0A0A6YYD5 115 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 A0A1B0GVC2 190 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 EEDO75530 441 aaKnown RBP17.08■□□□□ 0.32
CLN6-204ENST00000564752 PRKRAO75569 313 aaKnown RBP17.08■□□□□ 0.32
CLN6-204ENST00000564752 TOXO94900 526 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 SEMA3DO95025 777 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 SBK3P0C264 359 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 NR2F6P10588 404 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 BSGP35613 385 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 STT3AP46977 705 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 PLIN5Q00G26 463 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 FOLH1Q04609 750 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 TFF3Q07654 80 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 BIKQ13323 160 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 HYAL4Q2M3T9 481 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 ACAD11Q709F0 780 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 RPS27LQ71UM5 84 aaKnown RBP17.08■□□□□ 0.32
CLN6-204ENST00000564752 OR4N5Q8IXE1 308 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
CLN6-204ENST00000564752 TANKQ92844 425 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 UCK2Q9BZX2 261 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 DDX31Q9H8H2 851 aaKnown RBP17.08■□□□□ 0.32
CLN6-204ENST00000564752 WDR41Q9HAD4 459 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 SACM1LQ9NTJ5 587 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 TMEM216Q9P0N5 145 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 TBK1Q9UHD2 729 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 HIVEP1P15822 2718 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 ZNF407Q9C0G0 2248 aa17.08■□□□□ 0.32
CLN6-204ENST00000564752 NKX2-6A6NCS4 301 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 OR14I1A6ND48 311 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 DYRK3O43781 588 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 TMPRSS11DO60235 418 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 IGKV3-11P04433 115 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 P04436 131 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 FAM58BPP0C7Q3 252 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 TSPAN8P19075 237 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 CDH13P55290 713 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 NUP107P57740 925 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 HERVK_113P63132 956 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 FOXO1Q12778 655 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 ASPHQ12797 758 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 MRM1Q6IN84 353 aaKnown RBP17.07■□□□□ 0.32
CLN6-204ENST00000564752 FAM47EQ6ZV65 393 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 CCDC71Q8IV32 467 aaPredicted RBP17.07■□□□□ 0.32
CLN6-204ENST00000564752 FAM109AQ8N4B1 249 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 TMEM151AQ8N4L1 468 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 NUBPLQ8TB37 319 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 PPWD1Q96BP3 646 aaKnown RBP17.07■□□□□ 0.32
CLN6-204ENST00000564752 RBM18Q96H35 190 aaKnown RBP17.07■□□□□ 0.32
CLN6-204ENST00000564752 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 C1QTNF3Q9BXJ4 246 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 ERVK-6Q9BXR3 956 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 L2HGDHQ9H9P8 463 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 KCNJ16Q9NPI9 418 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 NPDC1Q9NQX5 325 aaPredicted RBP17.07■□□□□ 0.32
CLN6-204ENST00000564752 PNPLA3Q9NST1 481 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 LIPGQ9Y5X9 500 aa17.07■□□□□ 0.32
CLN6-204ENST00000564752 BCKDKO14874 412 aa17.06■□□□□ 0.32
CLN6-204ENST00000564752 PROM1O43490 865 aa17.06■□□□□ 0.32
CLN6-204ENST00000564752 AIFM1O95831 613 aa17.06■□□□□ 0.32
CLN6-204ENST00000564752 GBAP04062 536 aa17.06■□□□□ 0.32
CLN6-204ENST00000564752 CCL3P10147 92 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms