RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SAP18O00422 153 aaKnown RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 TRIM3O75382 744 aaPredicted RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 PIAS1O75925 651 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 LRATO95237 230 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 EPPINO95925 133 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 C1QAP02745 245 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 DRD2P14416 443 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 TACR1P25103 407 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 TLX1P31314 330 aaPredicted RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 TIMP3P35625 211 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 TRPC1P48995 793 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 HERVK_113P63132 956 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 ERVK-8P63133 956 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 ADAM8P78325 824 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 PCDH1Q08174 1060 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 CRYZQ08257 329 aaKnown RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 CBLBQ13191 982 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 DAZAP2Q15038 168 aaPredicted RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 EBPQ15125 230 aaKnown RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 DEPDC1Q5TB30 811 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 GPR180Q86V85 440 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 ZCCHC7Q8N3Z6 543 aaKnown RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 OR7G3Q8NG95 312 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 CDKL2Q92772 493 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 EXT2Q93063 718 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 HSPBAP1Q96EW2 488 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 UBXN10Q96LJ8 280 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 RBBP8Q99708 897 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 CENPKQ9BS16 269 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 SORBS1Q9BX66 1292 aaKnown RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 ERVK-6Q9BXR3 956 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 OR51B5Q9H339 312 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
CDR2-204ENST00000564542 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 TXNDC16Q9P2K2 825 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 ERVK-19Q9WJR5 959 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 OR6C76A6NM76 312 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 KDM4EB2RXH2 506 aaPredicted RBP12.93□□□□□ -0.34
CDR2-204ENST00000564542 PLPP1O14494 284 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 PRKRAO75569 313 aaKnown RBP12.93□□□□□ -0.34
CDR2-204ENST00000564542 RAF1P04049 648 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 BUD31P41223 144 aaPredicted RBP12.93□□□□□ -0.34
CDR2-204ENST00000564542 PIK3CBP42338 1070 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 RAP1GDS1P52306 607 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 ARFIP1P53367 373 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 HNRNPH2P55795 449 aaKnown RBP12.93□□□□□ -0.34
CDR2-204ENST00000564542 WNT3P56703 355 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 SLC37A1P57057 533 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 RAB10P61026 200 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 RPS6KA2Q15349 733 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 C18orf63Q68DL7 685 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 POMZP3Q6PJE2 187 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 CAPN12Q6ZSI9 719 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 PM20D2Q8IYS1 436 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 TAGAPQ8N103 731 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 RIT1Q92963 219 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 RGMAQ96B86 450 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 TIMP4Q99727 224 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 CPNE1Q99829 537 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 TRIM31Q9BZY9 425 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 PRDM14Q9GZV8 571 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 ADGRE2Q9UHX3 823 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 IKBKGQ9Y6K9 419 aa12.93□□□□□ -0.34
CDR2-204ENST00000564542 TUBAL3A6NHL2 446 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
CDR2-204ENST00000564542 K7EPI3 171 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 TP53I11O14683 189 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 OR10H2O60403 315 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 ATE1O95260 518 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 GPR75O95800 540 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 IL2RAP01589 272 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 CLPSP04118 112 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 HPNP05981 417 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 GALNSP34059 522 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 GP5P40197 560 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 ZNF136P52737 540 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 DDX39BQ13838 428 aaKnown RBP12.92□□□□□ -0.34
CDR2-204ENST00000564542 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
CDR2-204ENST00000564542 SF3B4Q15427 424 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDR2-204ENST00000564542 NSUN5P2Q63ZY6 315 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 TMEM198Q66K66 360 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 GRHL2Q6ISB3 625 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 HUS1BQ8NHY5 278 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 STAG3L4Q8TBR4 150 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 DOK4Q8TEW6 326 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 DIO2Q92813 273 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 ZNF717Q9BY31 904 aaPredicted RBP12.92□□□□□ -0.34
CDR2-204ENST00000564542 UBQLN3Q9H347 655 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 ALG9Q9H6U8 611 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 OPTCQ9UBM4 332 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 TSC22D4Q9Y3Q8 395 aa12.92□□□□□ -0.34
CDR2-204ENST00000564542 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
CDR2-204ENST00000564542 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
CDR2-204ENST00000564542 CAPN14A8MX76 684 aa12.91□□□□□ -0.34
CDR2-204ENST00000564542 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms