RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 PGRMC2O15173 223 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 PER3P56645 1201 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 ZNF267Q14586 743 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-207ENST00000564060 IMPG1Q17R60 797 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.42■□□□□ 0.54
CMTM3-207ENST00000564060 KRTCAP3Q53RY4 240 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 SLC48A1Q6P1K1 146 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-207ENST00000564060 ZNF227Q86WZ6 799 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 GALNT12Q8IXK2 581 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 BANPQ8N9N5 519 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 SREK1Q8WXA9 508 aaKnown RBP18.42■□□□□ 0.54
CMTM3-207ENST00000564060 KCNA7Q96RP8 456 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 TMEM109Q9BVC6 243 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 SENP1Q9P0U3 644 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 OSGIN2Q9Y236 505 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 TIMM22Q9Y584 194 aa18.42■□□□□ 0.54
CMTM3-207ENST00000564060 ASH1LQ9NR48 2969 aaKnown RBP18.41■□□□□ 0.54
CMTM3-207ENST00000564060 GNG14A0A1W2PPG7 69 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 PCDH7O60245 1069 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 TRIM13O60858 407 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 SEMA7AO75326 666 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 UNC5CO95185 931 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 CPMP14384 443 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 PORP16435 677 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-207ENST00000564060 ZNF24P17028 368 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 HTR6P50406 440 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 XKP51811 444 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 PCLAFQ15004 111 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 C4orf17Q53FE4 359 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 DND1Q8IYX4 353 aaKnown RBP18.41■□□□□ 0.54
CMTM3-207ENST00000564060 SLC15A4Q8N697 577 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 GOLM1Q8NBJ4 401 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 PSD4Q8NDX1 1056 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 TM4SF18Q96CE8 201 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 SGCZQ96LD1 299 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 SHCBP1LQ9BZQ2 653 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 LIN28AQ9H9Z2 209 aaKnown RBP18.41■□□□□ 0.54
CMTM3-207ENST00000564060 RAB21Q9UL25 225 aa18.41■□□□□ 0.54
CMTM3-207ENST00000564060 LRRK2Q5S007 2527 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 A0A1B0GUH1 482 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 WASHC1A8K0Z3 465 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 UBFD1O14562 309 aaKnown RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 STSP08842 583 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 UROSP10746 265 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 DRD2P14416 443 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 CSNK2A2P19784 350 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 MST1P26927 711 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 TIA1P31483 386 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 SOX3P41225 446 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 MEOX1P50221 254 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 HEPACAMQ14CZ8 416 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 GALNT18Q6P9A2 607 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 IL20RBQ6UXL0 311 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 C16orf47Q6ZP98 133 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 DGAT2L6Q6ZPD8 337 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 RTL4Q6ZR62 310 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 C10orf107Q8IVU9 208 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 C9orf40Q8IXQ3 194 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 SAMD14Q8IZD0 417 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 KLHL29Q96CT2 875 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 GPR137Q96N19 417 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 C12orf65Q9H3J6 166 aaKnown RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 CXorf21Q9HAI6 301 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 RRAGDQ9NQL2 400 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 SIRT5Q9NXA8 310 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 ERRFI1Q9UJM3 462 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-207ENST00000564060 ZNF780BQ9Y6R6 833 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 PTPN13Q12923 2485 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 GTF3C1Q12789 2109 aa18.4■□□□□ 0.54
CMTM3-207ENST00000564060 ERAL1O75616 437 aaKnown RBP18.39■□□□□ 0.53
CMTM3-207ENST00000564060 OR6B1O95007 311 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 CHN1P15882 459 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 NT5EP21589 574 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 ALDH9A1P49189 494 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 SLC37A1P57057 533 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 KCNK10P57789 538 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 HMGCS1Q01581 520 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 SRSF11Q05519 484 aaKnown RBP18.39■□□□□ 0.53
CMTM3-207ENST00000564060 KRT71Q3SY84 523 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 PIGGQ5H8A4 983 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 SPDYAQ5MJ70 313 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 SULF2Q8IWU5 870 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 CPSF7Q8N684 471 aaKnown RBP18.39■□□□□ 0.53
CMTM3-207ENST00000564060 OR7G1Q8NGA0 311 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 UCN3Q969E3 161 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 METTL2AQ96IZ6 378 aaKnown RBP18.39■□□□□ 0.53
CMTM3-207ENST00000564060 FAM111AQ96PZ2 611 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 GAL3ST4Q96RP7 486 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 CES1P1Q9UKY3 287 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 CFL2Q9Y281 166 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 EXPH5Q8NEV8 1989 aa18.39■□□□□ 0.53
CMTM3-207ENST00000564060 DIDO1Q9BTC0 2240 aaKnown RBP18.38■□□□□ 0.53
CMTM3-207ENST00000564060 HRKO00198 91 aa18.38■□□□□ 0.53
CMTM3-207ENST00000564060 PEX1O43933 1283 aa18.38■□□□□ 0.53
CMTM3-207ENST00000564060 RSL1D1O76021 490 aaKnown RBP18.38■□□□□ 0.53
CMTM3-207ENST00000564060 CHEK2O96017 543 aa18.38■□□□□ 0.53
CMTM3-207ENST00000564060 ATP1B1P05026 303 aa18.38■□□□□ 0.53
CMTM3-207ENST00000564060 CASP6P55212 293 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms