RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 NT5DC2Q9H857 520 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ADGRE2Q9UHX3 823 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 CAMK2AQ9UQM7 478 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 JRKLQ9Y4A0 524 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 YLPM1P49750 1951 aaKnown RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 RNF212BA8MTL3 300 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 A8MXE2 369 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 TAPBPO15533 448 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF37AP17032 561 aaPredicted RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 CRYGSP22914 178 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 ATP5A1P25705 553 aaKnown RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 MTTPP55157 894 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 FBXW4P57775 412 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 PPP2R2BQ00005 443 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 CDKL1Q00532 357 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 E2F2Q14209 437 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 FBXO48Q5FWF7 155 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 SYDE1Q6ZW31 735 aaPredicted RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 GCNT2Q8N0V5 402 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 LIX1Q8N485 282 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 TBC1D19Q8N5T2 526 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 SLC15A4Q8N697 577 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 BBOF1Q8ND07 529 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 MAPK1IP1LQ8NDC0 245 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 FAM13CQ8NE31 585 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 OR5L2Q8NGL0 311 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 ATL1Q8WXF7 558 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 UCN3Q969E3 161 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 RHBDF1Q96CC6 855 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 WDR34Q96EX3 536 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 PDLIM5Q96HC4 596 aaKnown RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 RILPQ96NA2 401 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 GNRHR2Q96P88 292 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 SFXN3Q9BWM7 321 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 MS4A8Q9BY19 250 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF717Q9BY31 904 aaPredicted RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 ANGPTL4Q9BY76 406 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 REXO4Q9GZR2 422 aaKnown RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 CALHM2Q9HA72 323 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 UBTD1Q9HAC8 227 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 LYRM4Q9HD34 91 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 CNIH4Q9P003 139 aa9.43□□□□□ -0.9
SF3B3-204ENST00000563739 MRPS33Q9Y291 106 aaKnown RBP9.43□□□□□ -0.9
SF3B3-204ENST00000563739 A0A087X1B8 175 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HCRTR2O43614 444 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 RCBTB2O95199 551 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 FGGP02679 453 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HIST1H2AGP0C0S8 130 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 CT62P0C5K7 136 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HIST1H2ADP20671 130 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 NR1H2P55055 460 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HNRNPH2P55795 449 aaKnown RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 IL2P60568 153 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HERVK_113P63132 956 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ERVK-8P63133 956 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 STX4Q12846 297 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 TNK1Q13470 666 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 SERTAD2Q14140 314 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 SPRED3Q2MJR0 410 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 VWA1Q6PCB0 445 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 TRMT10BQ6PF06 316 aaKnown RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF474Q6S9Z5 364 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 GALNT7Q86SF2 657 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 PM20D2Q8IYS1 436 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 RNF175Q8N4F7 328 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ACOT4Q8N9L9 421 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 FAM83FQ8NEG4 500 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 SLC22A8Q8TCC7 542 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ZPLD1Q8TCW7 415 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 CALML6Q8TD86 181 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF473Q8WTR7 871 aaKnown RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 PIGTQ969N2 578 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 PIK3IP1Q96FE7 263 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 LRRC46Q96FV0 321 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 FAR2Q96K12 515 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HIST1H2AHQ96KK5 128 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 CCL19Q99731 98 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 HIST1H2AJQ99878 128 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 MCMBPQ9BTE3 642 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 H2AFJQ9BTM1 129 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ERVK-6Q9BXR3 956 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 XAB2Q9HCS7 855 aaKnown RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF701Q9NV72 531 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-204ENST00000563739 KLHL28Q9NXS3 571 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 ERVK-19Q9WJR5 959 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 OARD1Q9Y530 152 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 PSAT1Q9Y617 370 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 KCNE2Q9Y6J6 123 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 PCNX3Q9H6A9 2034 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 MEGF8Q7Z7M0 2845 aa9.42□□□□□ -0.9
SF3B3-204ENST00000563739 A0A1W2PNV4 684 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 MAGEB16A2A368 324 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 SYNDIG1LA6NDD5 238 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 WDR47O94967 919 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms