RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 APIPQ96GX9 242 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 APOPT1Q96IL0 206 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 DGAT2Q96PD7 388 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 ROPN1BQ9BZX4 212 aaPredicted RBP13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 ROPN1Q9HAT0 212 aaPredicted RBP13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 KLHL1Q9NR64 748 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 VPS29Q9UBQ0 182 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 MCM8Q9UJA3 840 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 PCNX1Q96RV3 2341 aa13.71□□□□□ -0.21
RPUSD1-204ENST00000563560 DNAJC13O75165 2243 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 FCHO1O14526 889 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 COPEO14579 308 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 TYROBPO43914 113 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 ULK1O75385 1050 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 KRT6AP02538 564 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 KRT6BP04259 564 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CPA3P15088 417 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CD46P15529 392 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 SOX3P41225 446 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 KRT6CP48668 564 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 TRA2BP62995 288 aaKnown RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 HMGCS1Q01581 520 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 EBPQ15125 230 aaKnown RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CEBPEQ15744 281 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PRSS53Q2L4Q9 553 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 LIPMQ5VYY2 423 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 RNF165Q6ZSG1 346 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 FGD2Q7Z6J4 655 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CPSF7Q8N684 471 aaKnown RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 GBP7Q8N8V2 638 aaPredicted RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 ZFP62Q8NB50 900 aaPredicted RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 TMEM178AQ8NBL3 297 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PRR7Q8TB68 274 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 DOK4Q8TEW6 326 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 CTHRC1Q96CG8 243 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 PELOQ9BRX2 385 aaKnown RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 GATA5Q9BWX5 397 aaPredicted RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 AHSPQ9NZD4 102 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 SLC17A7Q9P2U7 560 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 EXO1Q9UQ84 846 aaKnown RBP13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 ZNF835Q9Y2P0 537 aa13.7□□□□□ -0.22
RPUSD1-204ENST00000563560 FREM3P0C091 2139 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ITPR2Q14571 2701 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 NINQ8N4C6 2090 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 A0A0G2JMM0 328 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 A0A1W2PPB8 328 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 A0A1W2PRS3 328 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ARHGAP10A1A4S6 786 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 C1orf226A1L170 272 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 KIR3DP1A8MWS1 328 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 WWP2O00308 870 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CRYABP02511 175 aaKnown RBP13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CPMP14384 443 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 PRPH2P23942 346 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ETV4P43268 484 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 SSR4P51571 173 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 MAPK12P53778 367 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 KCNK10P57789 538 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 NAA20P61599 178 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ERVK-8P63133 956 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 OC90Q02509 493 aaPredicted RBP13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 KIAA0040Q15053 153 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 PRICKLE4Q2TBC4 344 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CES4AQ5XG92 561 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 GPALPP1Q8IXQ4 340 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CYP4Z2PQ8N1L4 340 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 HORMAD2Q8N7B1 307 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CCNYL1Q8N7R7 359 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 SIMC1Q8NDZ2 872 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 SSC4DQ8WTU2 575 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 CNRIP1Q96F85 164 aaPredicted RBP13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 RBM18Q96H35 190 aaKnown RBP13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 FCRL1Q96LA6 429 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 C5orf34Q96MH7 638 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 GPR137Q96N19 417 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 PROK2Q9HC23 129 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ERVK-19Q9WJR5 959 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 ADGRG4Q8IZF6 3080 aa13.69□□□□□ -0.22
RPUSD1-204ENST00000563560 NAV2Q8IVL1 2488 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 ATP1B1P05026 303 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 TUBBP07437 444 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 TNNI3P19429 210 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 SERPINB3P29508 390 aa13.68□□□□□ -0.22
RPUSD1-204ENST00000563560 ALDH3A1P30838 453 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms