RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 REEP5Q00765 189 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 BNC1Q01954 994 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 TARDBPQ13148 414 aaKnown RBP eCLIP12.41□□□□□ -0.42
USB1-207ENST00000563149 NFE2L1Q14494 772 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 POM121L1PQ3SYA9 428 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 TMEM52BQ4KMG9 183 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 C1orf53Q5VUE5 145 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 RSBN1Q5VWQ0 802 aaPredicted RBP12.41□□□□□ -0.42
USB1-207ENST00000563149 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 NUDT13Q86X67 352 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 CELF2-AS1Q8N7Q2 184 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 TCEANCQ8N8B7 351 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 BARHL1Q9BZE3 327 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 TMEM245Q9H330 911 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 CLEC2DQ9UHP7 191 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 ZNF221Q9UK13 617 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 A4GNTQ9UNA3 340 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 IRAK3Q9Y616 596 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 V9GYH0 126 aa12.41□□□□□ -0.42
USB1-207ENST00000563149 CENPFP49454 3210 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 STK25O00506 426 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 KIAA0355O15063 1070 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 RGS5O15539 181 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
USB1-207ENST00000563149 SEMA7AO75326 666 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 RHOP08100 348 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 C6P13671 934 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 DRD2P14416 443 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 CPEP16870 476 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 GSTM3P21266 225 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 PPP2R1BP30154 601 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 CCT3P49368 545 aaKnown RBP12.4□□□□□ -0.42
USB1-207ENST00000563149 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
USB1-207ENST00000563149 CCR8P51685 355 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 GPR50Q13585 617 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 CARTPTQ16568 116 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 HSDL2Q6YN16 418 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 MMAAQ8IVH4 418 aaKnown RBP12.4□□□□□ -0.42
USB1-207ENST00000563149 PHC2Q8IXK0 858 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 TBC1D19Q8N5T2 526 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 BBS10Q8TAM1 723 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 SLC7A13Q8TCU3 470 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 OR8D1Q8WZ84 308 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 NR4A3Q92570 626 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 RGMAQ96B86 450 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 SLC35G5Q96KT7 338 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 CAPNS2Q96L46 248 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 SLC6A18Q96N87 628 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 IL17FQ96PD4 163 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 DEFB118Q96PH6 123 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 SNX18Q96RF0 628 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 SLC27A6Q9Y2P4 619 aa12.4□□□□□ -0.42
USB1-207ENST00000563149 DNMT3AQ9Y6K1 912 aaPredicted RBP12.4□□□□□ -0.42
USB1-207ENST00000563149 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 TTC36A6NLP5 189 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 K7ESM1 405 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 SLC28A2O43868 658 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 FKTNO75072 461 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 NME6O75414 186 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 SOX14O95416 240 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 HBQ1P09105 142 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 FEN1P39748 380 aaKnown RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 SOX3P41225 446 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 CDK5Q00535 292 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 DOC2BQ14184 412 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 GNA13Q14344 377 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 LARS2Q15031 903 aaKnown RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 DHCR24Q15392 516 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 C3orf38Q5JPI3 329 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 XKRXQ6PP77 449 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 RAB43Q86YS6 212 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 ANKRD53Q8N9V6 530 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 OR4D11Q8NGI4 311 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 OR5AR1Q8NGP9 310 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 OR6F1Q8NGZ6 308 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 GPR151Q8TDV0 419 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 TFGQ92734 400 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 RAB8BQ92930 207 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 SLC25A46Q96AG3 418 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 KIAA1143Q96AT1 154 aaPredicted RBP12.39□□□□□ -0.43
USB1-207ENST00000563149 ARRDC3Q96B67 414 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 MSLNLQ96KJ4 702 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 F2RL3Q96RI0 385 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 MED18Q9BUE0 208 aa12.39□□□□□ -0.43
USB1-207ENST00000563149 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms