RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DGKQP52824 942 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
SF3B3-202ENST00000562722 TOMM20Q15388 145 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 GRTP1Q5TC63 336 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 HLA-DQA1Q5Y7H0 255 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 CYP20A1Q6UW02 462 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 C3orf62Q6ZUJ4 267 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 TGIF2LYQ8IUE0 185 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 LRRC25Q8N386 305 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-202ENST00000562722 PPM1NQ8N819 430 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 DIO2Q92813 273 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 UBXN10Q96LJ8 280 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 LIME1Q9H400 295 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 ACTR8Q9H981 624 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 WDR41Q9HAD4 459 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 DMRT3Q9NQL9 472 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 LYARQ9NX58 379 aaKnown RBP11.94□□□□□ -0.5
SF3B3-202ENST00000562722 QPCTLQ9NXS2 382 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 MTRF1LQ9UGC7 380 aaKnown RBP11.94□□□□□ -0.5
SF3B3-202ENST00000562722 PLEKHA6Q9Y2H5 1048 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 CHCHD2Q9Y6H1 151 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-202ENST00000562722 DNAJC13O75165 2243 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 FAM159BA6NKW6 160 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 CAPN14A8MX76 684 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 TP53I11O14683 189 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 EIF3HO15372 352 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■■■■□ 23.1
SF3B3-202ENST00000562722 KERAO60938 352 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 FAM155BO75949 473 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 GPR75O95800 540 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 LTA4HP09960 611 aaKnown RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 GFAPP14136 432 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 KLK2P20151 261 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 CRABP2P29373 138 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ARL1P40616 181 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 MASP1P48740 699 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ASCL1P50553 236 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 WNT3P56703 355 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 RPS13P62277 151 aaKnown RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 EBPQ15125 230 aaKnown RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 TBCELQ5QJ74 424 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 TMEM64Q6YI46 380 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ISCA2Q86U28 154 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ZCCHC7Q8N3Z6 543 aaKnown RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 REPS1Q96D71 796 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 ZNF358Q9NW07 568 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 CNOT11Q9UKZ1 510 aaKnown RBP11.93□□□□□ -0.5
SF3B3-202ENST00000562722 PCDHGA11Q9Y5H2 935 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 SPG11Q96JI7 2443 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 MTORP42345 2549 aa11.93□□□□□ -0.5
SF3B3-202ENST00000562722 C2orf92A0A1B0GVN3 265 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 A6NNC1 897 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 WASHC1A8K0Z3 465 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SYCE1LA8MT33 242 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SYT5O00445 386 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 PROM1O43490 865 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 EEDO75530 441 aaKnown RBP11.92□□□□□ -0.5
SF3B3-202ENST00000562722 IL2RAP01589 272 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 FAM58BPP0C7Q3 252 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SLC35E2BP0CK96 405 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 PTX3P26022 381 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SLC37A1P57057 533 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 DLG1Q12959 904 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 DUSP8Q13202 625 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 E2F2Q14209 437 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 NTRK2Q16620 822 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 CPSF6Q16630 551 aaKnown RBP eCLIP11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SPRED3Q2MJR0 410 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 KRTAP21-3Q3LHN1 58 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 KBTBD12Q3ZCT8 623 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 FLYWCH1Q4VC44 716 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 SEM1Q6ZVN7 128 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 MAATS1Q7Z4T9 603 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 CCDC25Q86WR0 208 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 CDC20BQ86Y33 519 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 RELL2Q8NC24 303 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-202ENST00000562722 TNIP2Q8NFZ5 429 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
SF3B3-202ENST00000562722 HSPBAP1Q96EW2 488 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 RILPQ96NA2 401 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 ERP44Q9BS26 406 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 CXXC4Q9H2H0 198 aa11.92□□□□□ -0.5
SF3B3-202ENST00000562722 KCNF1Q9H3M0 494 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms