RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 KANSL1Q7Z3B3 1105 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 WDR5BQ86VZ2 330 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF761Q86XN6 746 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 SHISA5Q8N114 240 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 DNAJC22Q8N4W6 341 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 TBC1D19Q8N5T2 526 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 NAXEQ8NCW5 288 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 SRFBP1Q8NEF9 429 aaKnown RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 OR52N2Q8NGI0 321 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 OR10G6Q8NH81 332 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 LMX1AQ8TE12 382 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 FIG4Q92562 907 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 NEURL3Q96EH8 262 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 CENPNQ96H22 339 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF597Q96LX8 424 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF681Q96N22 645 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF285Q96NJ3 590 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 TRAPPC9Q96Q05 1148 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 BTBD9Q96Q07 612 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 DPH2Q9BQC3 489 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 EFHD1Q9BUP0 239 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 CHID1Q9BWS9 393 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 SEMA6CQ9H3T2 930 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 TMEM38AQ9H6F2 299 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 MAGIXQ9H6Y5 334 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 COQ10BQ9H8M1 238 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ERVMER34-1Q9H9K5 563 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 FAM60AQ9NP50 221 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ACSS1Q9NUB1 689 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 HRASLS2Q9NWW9 162 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 UCKL1Q9NWZ5 548 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 C5AR2Q9P296 337 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 SPASTQ9UBP0 616 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 UTS2RQ9UKP6 389 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 LRCH1Q9Y2L9 728 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 MRPS2Q9Y399 296 aaKnown RBP6.17□□□□□ -1.42
CAPN3-210ENST00000561817 DTNAQ9Y4J8 743 aa6.17□□□□□ -1.42
CAPN3-210ENST00000561817 A0A0J9YVX5 310 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 A0A1W2PS29 197 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 GSAPA4D1B5 854 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 FAM149AA5PLN7 773 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 M0R082 166 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 SOCS2O14508 198 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 BCAT2O15382 392 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 AQP9O43315 295 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 DENRO43583 198 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PRKD3O94806 890 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 MED26O95402 600 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 STAMBPO95630 424 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 SERPINA1P01009 418 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CTSBP07858 339 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 RAP2AP10114 183 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 FCGR1AP12314 374 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ETFAP13804 333 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 UQCRBP14927 111 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 RAC2P15153 192 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ST6GAL1P15907 406 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CKMT2P17540 419 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 UQCRC2P22695 453 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 FASP25445 335 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 KDELR2P33947 212 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CDK9P50750 372 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PCBP3P57721 371 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 RAB8AP61006 207 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 HNRNPKP61978 463 aaKnown RBP eCLIP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 RBBP4Q09028 425 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 TCF15Q12870 199 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 RUNX2Q13950 521 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PRTGQ2VWP7 1150 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 MANEAQ5SRI9 462 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 C18orf63Q68DL7 685 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 FAM180BQ6P0A1 224 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 SLC48A1Q6P1K1 146 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 TRIM40Q6P9F5 258 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CBLL1Q75N03 491 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 EIF3MQ7L2H7 374 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 OOSP2Q86WS3 158 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 GKN2Q86XP6 184 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 EID3Q8N140 333 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 SLC25A45Q8N413 288 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PACRGLQ8N7B6 248 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 AVL9Q8NBF6 648 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CATSPER1Q8NEC5 780 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF417Q8TAU3 575 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 FBXO30Q8TB52 745 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PNPT1Q8TCS8 783 aaKnown RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 GATA6Q92908 595 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 CNRIP1Q96F85 164 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PYURFQ96I23 114 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 AMDHD1Q96NU7 426 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF587Q96SQ5 575 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-210ENST00000561817 PRRX2Q99811 253 aa6.16□□□□□ -1.42
CAPN3-210ENST00000561817 MAPKAP1Q9BPZ7 522 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms