RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SYPP08247 313 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 TFPTP0C1Z6 253 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SP9P0CG40 484 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 C8orf89P0DMQ9 161 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 RNH1P13489 461 aaKnown RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 CPMP14384 443 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 PORP16435 677 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SELENOWP63302 87 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 OLR1P78380 273 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SIM1P81133 766 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 CFHR1Q03591 330 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 DUSP2Q05923 314 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 GNA13Q14344 377 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF750Q32MQ0 723 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 AMZ1Q400G9 498 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 PIWIL3Q7Z3Z3 882 aaKnown RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 GATAD2AQ86YP4 633 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 D2HGDHQ8N465 521 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 Q8N9G6 341 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 OR9A4Q8NGU2 314 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 LZICQ8WZA0 190 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 NAT6Q93015 286 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SLC41A2Q96JW4 573 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 CIB1Q99828 191 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 DPYSL5Q9BPU6 564 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 DOHHQ9BU89 302 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 TMEM121BQ9BXQ6 578 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 PTGFRNQ9P2B2 879 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 CACNA1EQ15878 2313 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SAC3D1A6NKF1 404 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 H0YIG0 161 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 HMGN4O00479 90 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CHST10O43529 356 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 DENRO43583 198 aaKnown RBP16.1■□□□□ 0.17
HDDC3-206ENST00000561036 FOXS1O43638 330 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 ASNA1O43681 348 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 DPM1O60762 260 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 RDH16O75452 317 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 PDE9AO76083 593 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 BMP10O95393 424 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CST1P01037 141 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CKMT2P17540 419 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 MATN1P21941 496 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CSF2RBP32927 897 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 AVPR1BP47901 424 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CLCN2P51788 898 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CASP9P55211 416 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 SHC2P98077 582 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 FAM214AQ32MH5 1076 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 YOD1Q5VVQ6 348 aaPredicted RBP16.1■□□□□ 0.17
HDDC3-206ENST00000561036 PRAMEF8Q5VWM4 474 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 PRAMEF7Q5VXH5 474 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 TNFAIP8L2Q6P589 184 aaPredicted RBP16.1■□□□□ 0.17
HDDC3-206ENST00000561036 TLDC1Q6P9B6 456 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 TMEM107Q6UX40 140 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 ZDHHC21Q8IVQ6 265 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 SVOPLQ8N434 492 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 GALNT4Q8N4A0 578 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 OR5T3Q8NGG3 340 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 OR9A2Q8NGT5 310 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 SLC38A5Q8WUX1 472 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 HSH2DQ96JZ2 352 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 NTN4Q9HB63 628 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 P2RX2Q9UBL9 471 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 BAG5Q9UL15 447 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 OAZ3Q9UMX2 235 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 CLCA2Q9UQC9 943 aa16.1■□□□□ 0.17
HDDC3-206ENST00000561036 MRPS33Q9Y291 106 aaKnown RBP16.1■□□□□ 0.17
HDDC3-206ENST00000561036 GOLGA4Q13439 2230 aaKnown RBP16.09■□□□□ 0.17
HDDC3-206ENST00000561036 A0A087WV62 115 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 UPK1AO00322 258 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 ACOX3O15254 700 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 SIGLEC6O43699 453 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 PCDHGA12O60330 932 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 MT-ND1P03886 318 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 ATP1B1P05026 303 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 CTSBP07858 339 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 NELFEP18615 380 aaKnown RBP16.09■□□□□ 0.17
HDDC3-206ENST00000561036 CRYBA2P53672 197 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 MAPK10P53779 464 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 FOLH1Q04609 750 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 CLPPQ16740 277 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-206ENST00000561036 TMEM71Q6P5X7 295 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 EPHX4Q8IUS5 362 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF595Q8IYB9 648 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 LGI4Q8N135 537 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 CBR4Q8N4T8 237 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 NUP43Q8NFH3 380 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 MVB12AQ96EY5 273 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 LOXL4Q96JB6 756 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 VPS50Q96JG6 964 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 NR1H4Q96RI1 486 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-206ENST00000561036 SLC29A1Q99808 456 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 OSBPL11Q9BXB4 747 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 OR51I1Q9H343 314 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 SERHL2Q9H4I8 314 aa16.09■□□□□ 0.17
HDDC3-206ENST00000561036 IRAK4Q9NWZ3 460 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms