RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KRBA2Q6ZNG9 492 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 KIAA0408Q6ZU52 694 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LANCL3Q6ZV70 420 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ABHD13Q7L211 337 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ENOSF1Q7L5Y1 443 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 MAATS1Q7Z4T9 603 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 CPEB2Q7Z5Q1 589 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 BCDIN3DQ7Z5W3 292 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 HOOK3Q86VS8 718 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 OR4N4Q8N0Y3 316 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SLC5A8Q8N695 610 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 NRACQ8N912 160 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 AMER3Q8N944 861 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TMEM35BQ8NCS4 154 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LPCAT1Q8NF37 534 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ZFAND2BQ8WV99 257 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TMEM171Q8WVE6 324 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 HSPBAP1Q96EW2 488 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 PIK3IP1Q96FE7 263 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ART5Q96L15 291 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LINC00615Q96LM1 132 aaPredicted RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 C10orf90Q96M02 699 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 WFIKKN1Q96NZ8 548 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 WDR83Q9BRX9 315 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 OR52A5Q9H2C5 316 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SLCO5A1Q9H2Y9 848 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 CXorf56Q9H5V9 222 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A7Q9HAW7 530 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A10Q9HAW8 530 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A8Q9HAW9 530 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 PCDH9Q9HC56 1237 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SH2D2AQ9NP31 389 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 IL26Q9NPH9 171 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.42□□□□□ -1.86
HERC1-211ENST00000560983 GAR1Q9NY12 217 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 PSD3Q9NYI0 1048 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 KLHL13Q9P2N7 655 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SPRR3Q9UBC9 169 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TRPC4Q9UBN4 977 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ACAD8Q9UKU7 415 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 KLF13Q9Y2Y9 288 aaPredicted RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 HEBP2Q9Y5Z4 205 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 DYSFO75923 2080 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ANKRD12Q6UB98 2062 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 MPDZO75970 2070 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 IGHV4-30-2A0A087WSY4 118 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 FAM166BA8MTA8 275 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 ARHGEF33A8MVX0 844 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 FAM157AC9JC47 383 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 EEF2KO00418 725 aaKnown RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 NDC80O14777 642 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SRPX2O60687 465 aaPredicted RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 CTSVO60911 334 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 NDUFS7O75251 213 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MYL1P05976 194 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MMP2P08253 660 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SLC35G4P0C7Q5 338 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 PIRTP0C851 137 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 PNMA6AP0CW24 399 aaPredicted RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 IGHV4-31P0DP07 118 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CREB1P16220 341 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TPH1P17752 444 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 MAGP20916 626 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CRYGSP22914 178 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 IL1R2P27930 398 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 PDHA2P29803 388 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 OPRM1P35372 400 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CD86P42081 329 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 AIF1P55008 147 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 ADARP55265 1226 aaKnown RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 PSG6Q00889 435 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 LOXL1Q08397 574 aaPredicted RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 CETN1Q12798 172 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 DPYSQ14117 519 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 STK38Q15208 465 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 EXT1Q16394 746 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SYT16Q17RD7 645 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 ZNF260Q3ZCT1 412 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 KHDC1LQ5JSQ8 128 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 WLSQ5T9L3 541 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 FRMPD2BQ6IN97 320 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 DEF8Q6ZN54 512 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 RGS9BPQ6ZS82 235 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 RFX8Q6ZV50 586 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SH2D5Q6ZV89 423 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 DET1Q7L5Y6 550 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 IRF2BP2Q7Z5L9 587 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 ANKRD37Q7Z713 158 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 SLC15A3Q8IY34 581 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 FAM71AQ8IYT1 594 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 IZUMO1Q8IYV9 350 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 CEP57L1Q8IYX8 460 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 KIF2BQ8N4N8 673 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TMEM251Q8N6I4 163 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 LMNTD1Q8N9Z9 388 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 TTC29Q8NA56 475 aaPredicted RBP3.41□□□□□ -1.86
HERC1-211ENST00000560983 DDHD1Q8NEL9 900 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 GDAP1Q8TB36 358 aa3.41□□□□□ -1.86
HERC1-211ENST00000560983 DTX3LQ8TDB6 740 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms