RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 IL13RA1P78552 427 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 CD47Q08722 323 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SPANXN2Q5MJ10 180 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TXNRD3NBQ6F5E7 133 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PODNL1Q6PEZ8 512 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TFAP2EQ6VUC0 442 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TAS1R1Q7RTX1 841 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF679Q8IYX0 411 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF366Q8N895 744 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF557Q8N988 423 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 AP2M1Q96CW1 435 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SGTBQ96EQ0 304 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 RDH12Q96NR8 316 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 RIT2Q99578 217 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ASCL2Q99929 193 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 GATA5Q9BWX5 397 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TEKT3Q9BXF9 490 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 LHX5Q9H2C1 402 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SAV1Q9H4B6 383 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 METTL7AQ9H8H3 244 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 MPP6Q9NZW5 540 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 MARCH4Q9P2E8 410 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 MBD2Q9UBB5 411 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 AGO1Q9UL18 857 aaKnown RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ZDHHC8Q9ULC8 765 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 DICER1Q9UPY3 1922 aaKnown RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PHIPQ8WWQ0 1821 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 CCDC182A6NF36 153 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 E2F3O00716 465 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TFECO14948 347 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TRIM3O75382 744 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ALPLP05186 524 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 C8AP07357 584 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 HSD17B1P14061 328 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 GPR15P49685 360 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PCOLCEQ15113 449 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP51A1Q16850 503 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 OTUD3Q5T2D3 398 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 HEPHL1Q6MZM0 1159 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 RRM2BQ7LG56 351 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PHF13Q86YI8 300 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PLXDC1Q8IUK5 500 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 HMGCLL1Q8TB92 370 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 TMEM174Q8WUU8 243 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 C18orf25Q96B23 403 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 BSCL2Q96G97 398 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PPP1R2P1Q96PQ5 205 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 DCLRE1CQ96SD1 692 aaKnown RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 EBNA1BP2Q99848 306 aaKnown RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC25A23Q9BV35 468 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ZBTB20Q9HC78 741 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SDHAF3Q9NRP4 125 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM118AQ9NWS6 357 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ABCD2Q9UBJ2 740 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 RNF150Q9ULK6 438 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 CA14Q9ULX7 337 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 GABRQQ9UN88 632 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 SPACA6W5XKT8 324 aa6.4□□□□□ -1.38
TSPAN3-209ENST00000560715 ELOA3CA0A087WX78 387 aaPredicted RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 TMEM191CA6NGB0 347 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ELOA3DA6NLF2 546 aaPredicted RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 HPRP00739 348 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 PSMB9P28065 219 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 MAGEA6P43360 314 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 GMPSP49915 693 aaPredicted RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 NRG3P56975 720 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 MYL6P60660 151 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 DUSP8Q13202 625 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 FASTKQ14296 549 aaKnown RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ELOA3BQ3SY89 546 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 FBXO48Q5FWF7 155 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 DENND1BQ6P3S1 775 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 PAPD4Q6PIY7 484 aaKnown RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 TEX261Q6UWH6 196 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 CENPVQ7Z7K6 275 aaPredicted RBP6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 CCDC190Q86UF4 302 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ELOA3Q8NG57 546 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 HUS1BQ8NHY5 278 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC9A6Q92581 669 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 RIT1Q92963 219 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ROPN1LQ96C74 230 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC47A1Q96FL8 570 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 CITED1Q99966 193 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 FEM1AQ9BSK4 669 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 TPPP3Q9BW30 176 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 SHARPINQ9H0F6 387 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 FAM83DQ9H4H8 585 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 SERINC1Q9NRX5 453 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 GLS2Q9UI32 602 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ZDHHC2Q9UIJ5 367 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 HACL1Q9UJ83 578 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ACSL5Q9ULC5 683 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 STAP1Q9ULZ2 295 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 DTX4Q9Y2E6 619 aa6.39□□□□□ -1.39
TSPAN3-209ENST00000560715 ACOT9Q9Y305 439 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms