RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RNF144AP50876 292 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CHCHD4Q8N4Q1 142 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CHIAQ9BZP6 476 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 HEBP1Q9NRV9 189 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 GPRC5BQ9NZH0 403 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 AK1P00568 194 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 OR52P1PQ8NH57 321 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 PDLIM7Q9NR12 457 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 AASSQ9UDR5 926 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 NUAK1O60285 661 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 GRK5P34947 590 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 ATG9BQ674R7 924 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 TBX10O75333 385 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SLC35E2BP0CK96 405 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 GALK2Q01415 458 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 CLEC1AQ8NC01 280 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 OR52B6Q8NGF0 335 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 OR8J3Q8NGG0 315 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 HSPA12BQ96MM6 686 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ANKMY1Q9P2S6 941 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 EPHA6Q9UF33 1036 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 A6NLC8 198 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SEC14L5O43304 696 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ATP4BP51164 291 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 MPP7Q5T2T1 576 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 CENPSQ8N2Z9 138 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DNAAF1Q8NEP3 725 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ZFYVE21Q9BQ24 234 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 EIF3FO00303 357 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 CPNE6O95741 557 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 RPL19P84098 196 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DCP2Q8IU60 420 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DOHHQ9BU89 302 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF221Q9UK13 617 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 TTLL8A6PVC2 850 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 HOXD8P13378 290 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 P2RY2P41231 377 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 PRKCDQ05655 676 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 LAPTM4AQ15012 233 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 SHQ1Q6PI26 577 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 RELL1Q8IUW5 271 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ERI1Q8IV48 349 aaKnown RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DOK4Q8TEW6 326 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ABHD5Q8WTS1 349 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 BOCQ9BWV1 1114 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 NUDT1P36639 197 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DPP6P42658 865 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 RCAN2Q14206 197 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 DEFB133Q30KQ1 61 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 PKP2Q99959 881 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-208ENST00000560371 IRF2P14316 349 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 HERV-K104P61576 105 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 NDUFAF5Q5TEU4 345 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 GPR137CQ8N3F9 429 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 TTTY10Q9BZA0 68 aa12.86□□□□□ -0.35
TRAF3-208ENST00000560371 hCG_1807616A0A1W2PRN6 198 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CST5P28325 142 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 EGFLAMQ63HQ2 1017 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 TAS1R1Q7RTX1 841 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 IL26Q9NPH9 171 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SMAD6O43541 496 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 ITIH1P19827 911 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 DCKP27707 260 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 MVKQ03426 396 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 LRP8Q14114 963 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 CST9Q5W186 159 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 YTHDF1Q9BYJ9 559 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 ENY2Q9NPA8 101 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 EIF3KQ9UBQ5 218 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 SEC14L4Q9UDX3 406 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
TRAF3-208ENST00000560371 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 PRKACGP22612 351 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 MSX1P28360 303 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 GGT2P36268 569 aa12.85□□□□□ -0.35
TRAF3-208ENST00000560371 ADAM15Q13444 863 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms