RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 LDLRP01130 860 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 GP1BBP13224 206 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 CHN1P15882 459 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 SOX3P41225 446 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 MEOX1P50221 254 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 HTR6P50406 440 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 XKP51811 444 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 TRA2BP62995 288 aaKnown RBP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 MPEG1Q2M385 716 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 PIGGQ5H8A4 983 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 OPN5Q6U736 354 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 RNF111Q6ZNA4 994 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 FRMD7Q6ZUT3 714 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 MDGA2Q7Z553 956 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 SULF2Q8IWU5 870 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 CPSF7Q8N684 471 aaKnown RBP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 DOK4Q8TEW6 326 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 GPR137Q96N19 417 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 KCNA7Q96RP8 456 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 FAIM2Q9BWQ8 316 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 ACPTQ9BZG2 426 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 IQCGQ9H095 443 aaKnown RBP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 C12orf65Q9H3J6 166 aaKnown RBP16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 LGALS13Q9UHV8 139 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 PSME2Q9UL46 239 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 NPIPA1Q9UND3 350 aa16.04■□□□□ 0.16
AC105339.3-201ENST00000560043 SERTM1A2A2V5 107 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 GOLGA6L10A6NI86 522 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 OR6C76A6NM76 312 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 UBFD1O14562 309 aaKnown RBP16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 CRCPO75575 148 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 WISP2O76076 250 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 RNF224P0DH78 156 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 PORP16435 677 aaPredicted RBP16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 ZNF24P17028 368 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 ACSM2AQ08AH3 577 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 ASPHQ12797 758 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SPIN4Q56A73 249 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 LIPMQ5VYY2 423 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 ACSM2BQ68CK6 577 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SLC48A1Q6P1K1 146 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 RTL4Q6ZR62 310 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SLC29A4Q7RTT9 530 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 TRABD2AQ86V40 505 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SIAH3Q8IW03 269 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 C9orf40Q8IXQ3 194 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SLC22A8Q8TCC7 542 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SGCZQ96LD1 299 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 TSPAN10Q9H1Z9 355 aaPredicted RBP16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 CXorf21Q9HAI6 301 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 RYDENQ9NUL5 291 aaKnown RBP16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 MCM8Q9UJA3 840 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 CES1P1Q9UKY3 287 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 PLLPQ9Y342 182 aa16.03■□□□□ 0.16
AC105339.3-201ENST00000560043 SPTAN1Q13813 2472 aaKnown RBP16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 ASNA1O43681 348 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 CPMP14384 443 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 SLC37A1P57057 533 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 HMGCS1Q01581 520 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 ERCC6LQ2NKX8 1250 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 C1QL3Q5VWW1 255 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 GALNT12Q8IXK2 581 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 BANPQ8N9N5 519 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 RELTQ969Z4 430 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 APOPT1Q96IL0 206 aa16.02■□□□□ 0.16
AC105339.3-201ENST00000560043 SPTBN1Q01082 2364 aaKnown RBP16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 TRGV8A0A0C4DH27 118 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 GNG14A0A1W2PPG7 69 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 A0A1W2PS29 197 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 PCDH7O60245 1069 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 ERAL1O75616 437 aaKnown RBP16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 CSNK2A2P19784 350 aaPredicted RBP16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 NT5EP21589 574 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 ALDH9A1P49189 494 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 CASP6P55212 293 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 FOXA1P55317 472 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 GPR85P60893 370 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 BTKQ06187 659 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 ZNF750Q32MQ0 723 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 RNFT1Q5M7Z0 435 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 SPDYAQ5MJ70 313 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 SCIMPQ6UWF3 145 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 FJX1Q86VR8 437 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 C10orf107Q8IVU9 208 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 SRRM1Q8IYB3 904 aaKnown RBP16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 MMP21Q8N119 569 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 ZFP62Q8NB50 900 aaPredicted RBP16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 GOLM1Q8NBJ4 401 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 KLHL29Q96CT2 875 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 APIPQ96GX9 242 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 MAGED4Q96JG8 741 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 GAL3ST4Q96RP7 486 aa16.01■□□□□ 0.15
AC105339.3-201ENST00000560043 PARD6BQ9BYG5 372 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms