RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PITHD1Q9GZP4 211 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 ANKRA2Q9H9E1 313 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ACTR5Q9H9F9 607 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 IL1RL2Q9HB29 575 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ANKHQ9HCJ1 492 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MYNNQ9NPC7 610 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SLC52A3Q9NQ40 469 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SDR39U1Q9NRG7 319 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 SLC6A13Q9NSD5 602 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ASIC5Q9NY37 505 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KCMF1Q9P0J7 381 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MCM8Q9UJA3 840 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PACSIN3Q9UKS6 424 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ACSL6Q9UKU0 697 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 RARRES3Q9UL19 164 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CLCA2Q9UQC9 943 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 EIF3LQ9Y262 564 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 NEUROG3Q9Y4Z2 214 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ASB4Q9Y574 426 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CAPN7Q9Y6W3 813 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PTPRZ1P23471 2315 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 PCNX2A6NKB5 2137 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SPTBN2O15020 2390 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 NUP210LQ5VU65 1888 aa4.9□□□□□ -1.62
SPG11-220ENST00000559933 PCSK5Q92824 1860 aa4.9□□□□□ -1.62
SPG11-220ENST00000559933 SDK2Q58EX2 2172 aa4.9□□□□□ -1.62
SPG11-220ENST00000559933 A0A1B0GX78 115 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 CCT8L1PA6NM43 557 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 MASP2O00187 686 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 DSCR3O14972 297 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 TOX3O15405 576 aaPredicted RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 CHST10O43529 356 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 B3GALT2O43825 422 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 FGF17O60258 216 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 SRPX2O60687 465 aaPredicted RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 B4GALT2O60909 372 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 LDB3O75112 727 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 ALOX12BO75342 701 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 ERAL1O75616 437 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 SLC22A3O75751 556 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 DCTN3O75935 186 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 MYO1DO94832 1006 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 SORBS2O94875 1100 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 SEMA3DO95025 777 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 SCELO95171 688 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 JMJD7P0C870 316 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 T-ENOLP0DO92 83 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 NR2F6P10588 404 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 FGF5P12034 268 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 COX4I1P13073 169 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 COX7A2P14406 83 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 CSRP1P21291 193 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 MAOAP21397 527 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 FBLP22087 321 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 CPN2P22792 545 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 GSTM2P28161 218 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RORAP35398 523 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 FEN1P39748 380 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 XCR1P46094 333 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 CDK9P50750 372 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 ATP4BP51164 291 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 POLR2JP52435 117 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 CASP9P55211 416 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 WNT3P56703 355 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RAB38P57729 211 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 STX1BP61266 288 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RPS18P62269 152 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 GABREP78334 506 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 BTG2P78543 158 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 E2F1Q01094 437 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 MC2RQ01718 297 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 TAGLNQ01995 201 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 TNFRSF17Q02223 184 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 ACY1Q03154 408 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RELAQ04206 551 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 ZNF33BQ06732 778 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 SRSF6Q13247 344 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 ILKQ13418 452 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 GAB1Q13480 694 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 TRA2AQ13595 282 aaKnown RBP eCLIP4.9□□□□□ -1.63
SPG11-220ENST00000559933 CAPRIN1Q14444 709 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 GRM7Q14831 915 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RPS6KA2Q15349 733 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 GSTA3Q16772 222 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 VWA2Q5GFL6 755 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 TCTE1Q5JU00 501 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 PAGE3Q5JUK9 113 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 MFSD4BQ5TF39 518 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 REP15Q6BDI9 236 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 FAAH2Q6GMR7 532 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 GALNT18Q6P9A2 607 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 C6orf89Q6UWU4 347 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 DGAT2L6Q6ZPD8 337 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 TRPM8Q7Z2W7 1104 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 TIPARPQ7Z3E1 657 aaKnown RBP4.9□□□□□ -1.63
SPG11-220ENST00000559933 REC114Q7Z4M0 266 aa4.9□□□□□ -1.63
SPG11-220ENST00000559933 GPR180Q86V85 440 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms