RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TNNI3P19429 210 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 FRKP42685 505 aaPredicted RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 TRPC1P48995 793 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 EMP2P54851 167 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 PSME3P61289 254 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 NCALDP61601 193 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 PUM1Q14671 1186 aaKnown RBP eCLIP9.78□□□□□ -0.845e-9■□□□□ 8.1
TPM1-221ENST00000559831 NCF4Q15080 339 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CEBPEQ15744 281 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 LACTB2Q53H82 288 aaPredicted RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 C6orf163Q5TEZ5 329 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 FAM69BQ5VUD6 431 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 MRPL14Q6P1L8 145 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 TMEM107Q6UX40 140 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 C16orf89Q6UX73 402 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 DLEU7Q6UYE1 221 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 TMEM151BQ8IW70 566 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 NLGN4XQ8N0W4 816 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CLEC4FQ8N1N0 589 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 ESX1Q8N693 406 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 ENDOVQ8N8Q3 282 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 NLGN4YQ8NFZ3 816 aaPredicted RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 OR5AK3PQ8NH89 298 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 SUN3Q8TAQ9 357 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 KAT2AQ92830 837 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 ROPN1LQ96C74 230 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 LRRC58Q96CX6 371 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CGREF1Q99674 301 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CRB3Q9BUF7 120 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 SPRY4Q9C004 299 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 B3GNT4Q9C0J1 378 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 PAIP1Q9H074 479 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 SLC26A1Q9H2B4 701 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CXorf36Q9H7Y0 433 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 PNO1Q9NRX1 252 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 SLC6A13Q9NSD5 602 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 WDR70Q9NW82 654 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 TAS2R9Q9NYW1 312 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 C3orf18Q9UK00 162 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 CROTQ9UKG9 612 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 KLK13Q9UKR3 277 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 PTRH2Q9Y3E5 179 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 RNF103-CHMP3A0A140T963 221 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 VSTM2BA6NLU5 285 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 CDRT15L2A8MXV6 281 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 IDSB3KWA1 339 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 STMND1H3BQB6 276 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 GYG2O15488 501 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 BRINP1O60477 761 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 ALOX12BO75342 701 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 RECKO95980 971 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SLC35E2P0CK97 266 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 TCN2P20062 427 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SPINK2P20155 84 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 CD82P27701 267 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 PTPN4P29074 926 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 CHI3L1P36222 383 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 CPOXP36551 454 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 FOLR3P41439 243 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 STT3AP46977 705 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 RASSF2P50749 326 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 EFNA3P52797 238 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 IGLV3-21P80748 117 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 GAB1Q13480 694 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SERTAD2Q14140 314 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 MAP7Q14244 749 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 MLC1Q15049 377 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 NSDHLQ15738 373 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 LRIF1Q5T3J3 769 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 ANGPTL8Q6UXH0 198 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 HACD2Q6Y1H2 254 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 LANCL3Q6ZV70 420 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 MED25Q71SY5 747 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 YTHDF3Q7Z739 585 aaKnown RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 MSRB3Q8IXL7 192 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 DEFB107AQ8IZN7 70 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 ST13P4Q8IZP2 240 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 KIF2BQ8N4N8 673 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 TRIML2Q8N7C3 387 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 DNAJB8Q8NHS0 232 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 PNPT1Q8TCS8 783 aaKnown RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 METTL21AQ8WXB1 218 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SLC7A6OSQ96CW6 309 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 AURKBQ96GD4 344 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 RBM18Q96H35 190 aaKnown RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 SPSB2Q99619 263 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SLC35A5Q9BS91 424 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 BTBD10Q9BSF8 475 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 TRIM8Q9BZR9 551 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 NRSN2Q9GZP1 204 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 WDR54Q9H977 334 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 NEUROD4Q9HD90 331 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SEMA3GQ9NS98 782 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 SIRT3Q9NTG7 399 aaPredicted RBP9.77□□□□□ -0.85
TPM1-221ENST00000559831 NDE1Q9NXR1 346 aa9.77□□□□□ -0.85
TPM1-221ENST00000559831 TAS2R1Q9NYW7 299 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms