RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PGM3O95394 542 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ZBTB11O95625 1053 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 ALPPL2P10696 532 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 MATN1P21941 496 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 ANXA11P50995 505 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 ALDH3A2P51648 485 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ARSFP54793 590 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 RAB38P57729 211 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 GPLD1P80108 840 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 PRR5P85299 388 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 BLMHQ13867 455 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 FAM53BQ14153 422 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 NDUFA9Q16795 377 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 INAVAQ3KP66 663 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 GARNL3Q5VVW2 1013 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 OR2T5Q6IEZ7 315 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 TMEM107Q6UX40 140 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 CHERPQ8IWX8 916 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 OR5T3Q8NGG3 340 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 OR2T29Q8NH02 315 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 LZICQ8WZA0 190 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 AHCYL2Q96HN2 611 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 TPD52L3Q96J77 140 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ZC3H10Q96K80 434 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 OR51I1Q9H343 314 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 CLK4Q9HAZ1 481 aaKnown RBP11.94□□□□□ -0.5
USP3-213ENST00000559711 C3orf14Q9HBI5 128 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 UBAP1Q9NZ09 502 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 NLGN3Q9NZ94 848 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 ABCG2Q9UNQ0 655 aa11.94□□□□□ -0.5
USP3-213ENST00000559711 VCANP13611 3396 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 PRAMEF27A3QJZ7 478 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 FITM1A5D6W6 292 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 C5orf58C9J3I9 102 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 SGK494L7N484 410 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 FOXS1O43638 330 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 GPR75O95800 540 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 HPRP00739 348 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 ALPLP05186 524 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 HMGN2P05204 90 aaKnown RBP11.93□□□□□ -0.5
USP3-213ENST00000559711 LYNP07948 512 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 OR12D1P0DN82 309 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 CPMP14384 443 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 PORP16435 677 aaPredicted RBP11.93□□□□□ -0.5
USP3-213ENST00000559711 PTGER1P34995 402 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 DCTP40126 519 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 MC3RP41968 323 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
USP3-213ENST00000559711 KHKP50053 298 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 IST1P53990 364 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 SKP1P63208 163 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 MRPS35P82673 323 aaKnown RBP11.93□□□□□ -0.5
USP3-213ENST00000559711 CFHR1Q03591 330 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 DAG1Q14118 895 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 TCTE1Q5JU00 501 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 UGT2A3Q6UWM9 527 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 STK32CQ86UX6 486 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 HIPK1Q86Z02 1210 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 PLXDC1Q8IUK5 500 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 ARMC8Q8IUR7 673 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 TMEM52Q8NDY8 209 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 OR9A4Q8NGU2 314 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 RAB8BQ92930 207 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 DUSP23Q9BVJ7 150 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 BATF3Q9NR55 127 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 SMPD3Q9NY59 655 aaPredicted RBP11.93□□□□□ -0.5
USP3-213ENST00000559711 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 P2RX2Q9UBL9 471 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 FBXO4Q9UKT5 387 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 BAG5Q9UL15 447 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 RAB23Q9ULC3 237 aa11.93□□□□□ -0.5
USP3-213ENST00000559711 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 hCG_2039718K7EN88 272 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 CHST10O43529 356 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 DUX1O43812 170 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 RDH16O75452 317 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 MED26O95402 600 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 OPN1SWP03999 348 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 BCHEP06276 602 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 IFI6P09912 130 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 CD1CP29017 333 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 PPM1FP49593 454 aaPredicted RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 MAN2A2P49641 1150 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 CHN2P52757 468 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 PRKAG1P54619 331 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 EMP3P54852 163 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 ITGA1P56199 1179 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 SHC2P98077 582 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 PPP2R2BQ00005 443 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 MERTKQ12866 999 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 LASP1Q14847 261 aaKnown RBP11.92□□□□□ -0.5
USP3-213ENST00000559711 LTB4RQ15722 352 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 SLC36A3Q495N2 470 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 IFI44LQ53G44 452 aa11.92□□□□□ -0.5
USP3-213ENST00000559711 OTUD3Q5T2D3 398 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms