RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HAS2Q92819 552 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 CMTM7Q96FZ5 175 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MAGEB10Q96LZ2 347 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MAPKAP1Q9BPZ7 522 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 TBCDQ9BTW9 1192 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 C1QTNF3Q9BXJ4 246 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF717Q9BY31 904 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 RNF32Q9H0A6 362 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 NOL11Q9H8H0 719 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 TBK1Q9UHD2 729 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 TMCO1Q9UM00 188 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ICE1Q9Y2F5 2266 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 IQANK1A0A1B0GTG1 560 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 A0A1W2PPM1 405 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 DYTNA2CJ06 578 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 A8MUA0 341 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 A8MUI8 341 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 TCP11X1B4DZS4 312 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 H3BS24 57 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 VPS4BO75351 444 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 DNAJC8O75937 253 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 CLDN9O95484 217 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 SCG5P05408 212 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 THBDP07204 575 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 SSR2P43308 183 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 NEK2P51955 445 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 CCNG1P51959 295 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 VSNL1P62760 191 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ARG2P78540 354 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 TGM3Q08188 693 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZRSR2Q15696 482 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ACER2Q5QJU3 275 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ABHD17BQ5VST6 288 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR4C11Q6IEV9 310 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 SH2D5Q6ZV89 423 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 CLNKQ7Z7G1 428 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 LCA5Q86VQ0 697 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF595Q8IYB9 648 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 BEST3Q8N1M1 668 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 APCDD1LQ8NCL9 501 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 SRFBP1Q8NEF9 429 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR4F6Q8NGB9 312 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR1N1Q8NGS0 311 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ACMSDQ8TDX5 336 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 UBLCP1Q8WVY7 318 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 CCDC140Q96MF4 163 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 NTMT1Q9BV86 223 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ROGDIQ9GZN7 287 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 KCNK13Q9HB14 408 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 LYRM4Q9HD34 91 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 SEMA4BQ9NPR2 832 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 PRTFDC1Q9NRG1 225 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ADGRE2Q9UHX3 823 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF225Q9UK10 706 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF223Q9UK11 482 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 EMCNQ9ULC0 261 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 VPS4AQ9UN37 437 aa5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MRPS33Q9Y291 106 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 COPG1Q9Y678 874 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 DIDO1Q9BTC0 2240 aaKnown RBP5.62□□□□□ -1.51
CTDSPL2-204ENST00000558966 MAST4O15021 2626 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TRAV17A0A0B4J275 112 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 OR5H15A6NDH6 313 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 FOXE1O00358 373 aaPredicted RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 CLDN4O14493 209 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TMPRSS11DO60235 418 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 LDB3O75112 727 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 EEDO75530 441 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 MYO1DO94832 1006 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 GSTA1P08263 222 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TSPAN8P19075 237 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 BSGP35613 385 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 HSD17B3P37058 310 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 ARL1P40616 181 aaPredicted RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLCO1A2P46721 670 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 GPR143P51810 404 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 RAP1GDS1P52306 607 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 CDH13P55290 713 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 HNRNPH2P55795 449 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 HERVK_113P63132 956 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLC13A2Q13183 592 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 CUL3Q13618 768 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TUBA3CQ13748 450 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TERF2Q15554 542 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 AP5B1Q2VPB7 878 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 GGTA1PQ4G0N0 100 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 UNC50Q53HI1 259 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 FRG2Q64ET8 278 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 RPUSD3Q6P087 351 aaKnown RBP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TUBA3EQ6PEY2 450 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 TDRPQ86YL5 185 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 MDS2Q8NDY4 140 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 GRHL3Q8TE85 626 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 ATP6V1E2Q96A05 226 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 RGMAQ96B86 450 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 REPS1Q96D71 796 aa5.61□□□□□ -1.51
CTDSPL2-204ENST00000558966 ZNF354BQ96LW1 612 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms