RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SLC35E2P0CK97 266 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 PTPN4P29074 926 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 RBMS1P29558 406 aaKnown RBP16.95■□□□□ 0.3
CLPX-203ENST00000558958 HSPB3Q12988 150 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 BIKQ13323 160 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 CAMK2BQ13554 666 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 MAP7Q14244 749 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 C8orf82Q6P1X6 216 aaPredicted RBP16.95■□□□□ 0.3
CLPX-203ENST00000558958 DNAJC14Q6Y2X3 702 aaPredicted RBP16.95■□□□□ 0.3
CLPX-203ENST00000558958 MSRB3Q8IXL7 192 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 PSMA8Q8TAA3 256 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 PHF12Q96QT6 1004 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 BTBD10Q9BSF8 475 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 ALOXE3Q9BYJ1 711 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 NRSN2Q9GZP1 204 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 NEUROD4Q9HD90 331 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 SLC25A37Q9NYZ2 338 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 GPN3Q9UHW5 284 aaPredicted RBP16.95■□□□□ 0.3
CLPX-203ENST00000558958 CROTQ9UKG9 612 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 NEUROG3Q9Y4Z2 214 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 PCDHB14Q9Y5E9 798 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 CDRT15L2A8MXV6 281 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 GSNP06396 782 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 ABCB1P08183 1280 aaPredicted RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 ZCCHC18P0CG32 403 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SERTAD2Q14140 314 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 GTDC1Q4AE62 458 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 ZNF621Q6ZSS3 439 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 ST13P4Q8IZP2 240 aaPredicted RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 ESX1Q8N693 406 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 PLPP5Q8NEB5 264 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 OR9A2Q8NGT5 310 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SPSB2Q99619 263 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 CGREF1Q99674 301 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 HOPXQ9BPY8 73 aaPredicted RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 GPATCH1Q9BRR8 931 aaKnown RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 SLC39A3Q9BRY0 314 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SOX17Q9H6I2 414 aaPredicted RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 CXorf36Q9H7Y0 433 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 ASCL3Q9NQ33 180 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SIRT3Q9NTG7 399 aaPredicted RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 NDE1Q9NXR1 346 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 VAPAQ9P0L0 249 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 NXT1Q9UKK6 140 aaKnown RBP16.94■□□□□ 0.3
CLPX-203ENST00000558958 VPS4AQ9UN37 437 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 NUP210LQ5VU65 1888 aa16.94■□□□□ 0.3
CLPX-203ENST00000558958 SDK2Q58EX2 2172 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 GYG2O15488 501 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 ANP32DO95626 131 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PTGER1P34995 402 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 CDK9P50750 372 aaKnown RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 FOXL2P58012 376 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 CAPRIN1Q14444 709 aaKnown RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 NCF4Q15080 339 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 LTB4RQ15722 352 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 C16orf89Q6UX73 402 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 TMEM151BQ8IW70 566 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PGAM4Q8N0Y7 254 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 C7orf57Q8NEG2 295 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 TSLPQ969D9 159 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 LRMDAQ9H2I8 198 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 NUP214P35658 2090 aaPredicted RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 DCHS1Q96JQ0 3298 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 TCRBV16S1A1N1A0A5B0 115 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 IDSB3KWA1 339 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 STMND1H3BQB6 276 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 OR10H2O60403 315 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 DXOO77932 396 aaKnown RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 HEXBP07686 556 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 CD63P08962 238 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 CD82P27701 267 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PLA2G5P39877 138 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 STT3AP46977 705 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PSME3P61289 254 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 GAB1Q13480 694 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLPX-203ENST00000558958 RTP5Q14D33 572 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 NSDHLQ15738 373 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 ASRGL1Q7L266 308 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 ZNF771Q7L3S4 317 aaPredicted RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 NLGN4XQ8N0W4 816 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 TRIML2Q8N7C3 387 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 ADCY4Q8NFM4 1077 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 NLGN4YQ8NFZ3 816 aaPredicted RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 CT55Q8WUE5 264 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 PPWD1Q96BP3 646 aaKnown RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 RBM18Q96H35 190 aaKnown RBP16.93■□□□□ 0.3
CLPX-203ENST00000558958 ANKRD27Q96NW4 1050 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 SEMA3GQ9NS98 782 aa16.93■□□□□ 0.3
CLPX-203ENST00000558958 SYNDIG1LA6NDD5 238 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.92■□□□□ 0.3
CLPX-203ENST00000558958 KLF7O75840 302 aaPredicted RBP16.92■□□□□ 0.3
CLPX-203ENST00000558958 CYC1P08574 325 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 RAB40ALP0C0E4 278 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 NT5EP21589 574 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 UQCRC2P22695 453 aa16.92■□□□□ 0.3
CLPX-203ENST00000558958 SLC6A2P23975 617 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms