RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CLEC3AO75596 197 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ETHE1O95571 254 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 FTCDO95954 541 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ENO2P09104 434 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 FBXO45P0C2W1 286 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CPN1P15169 458 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 GNAZP19086 355 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CRYGSP22914 178 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CHMP24386 653 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 IDUAP35475 653 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 PLA2G16P53816 162 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ATP5J2P56134 94 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 FAM27E3Q08E93 113 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 FOXF2Q12947 444 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 TBX2Q13207 712 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 TNK1Q13470 666 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 NTRK2Q16620 822 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CHRFAM7AQ494W8 412 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 EIPR1Q53HC9 387 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 WIPI1Q5MNZ9 446 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 ABHD17CQ6PCB6 329 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ENPP6Q6UWR7 440 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 TMIGD1Q6UXZ0 262 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 SLC29A4Q7RTT9 530 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 TMPRSS11BQ86T26 416 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 KIAA1328Q86T90 577 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 TXLNBQ8N3L3 684 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 OR10G3Q8NGC4 313 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 PPP1R14CQ8TAE6 165 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 SLC44A1Q8WWI5 657 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ZNF669Q96BR6 464 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 INTS12Q96CB8 462 aaKnown RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 LINGO1Q96FE5 620 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 HES6Q96HZ4 224 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 TSNARE1Q96NA8 513 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 QRFPRQ96P65 431 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 GNRHR2Q96P88 292 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 DGAT2Q96PD7 388 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 FAM111AQ96PZ2 611 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 UCN2Q96RP3 112 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 SLC39A3Q9BRY0 314 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 MED18Q9BUE0 208 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CAPS2Q9BXY5 557 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ANGPTL4Q9BY76 406 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 AICDAQ9GZX7 198 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 LACRTQ9GZZ8 138 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 SPNS1Q9H2V7 528 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 NT5DC2Q9H857 520 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 LYRM4Q9HD34 91 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 C20orf96Q9NUD7 363 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 ZNF701Q9NV72 531 aaPredicted RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 KLHL28Q9NXS3 571 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 ELOVL5Q9NYP7 299 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 FETUBQ9UGM5 382 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 PACSIN3Q9UKS6 424 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 CNOT11Q9UKZ1 510 aaKnown RBP4.73□□□□□ -1.65
SPG11-208ENST00000558155 TESMINQ9Y4I5 508 aa4.73□□□□□ -1.65
SPG11-208ENST00000558155 USF3Q68DE3 2245 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ZCWPW2A0A1B0GU75 182 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TCRBV7S3A2A0A539 114 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CTAGE15A4D2H0 777 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 C4orf51C9J302 202 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 H0Y3Z8 333 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 C16orf97H3BN30 126 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CDC7O00311 574 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 CD5LO43866 347 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SMNDC1O75940 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
SPG11-208ENST00000558155 IGKV3-11P04433 115 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CRHP06850 196 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 F7P08709 466 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 MLNP12872 115 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 POU2F1P14859 743 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CPN2P22792 545 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CERS1P27544 350 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TLX1P31314 330 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 HNRNPH1P31943 449 aaKnown RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 CPOXP36551 454 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 CD79BP40259 229 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SLC1A2P43004 574 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SLCO1A2P46721 670 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 STT3AP46977 705 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 KCNC1P48547 511 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 HNMTP50135 292 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 TERF1P54274 439 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 NAGLUP54802 743 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ID2Q02363 134 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SRYQ05066 204 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 PCDH1Q08174 1060 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 GPS1Q13098 491 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 SETDB1Q15047 1291 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ETFDHQ16134 617 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
SPG11-208ENST00000558155 CLEC12BQ2HXU8 276 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 AP5B1Q2VPB7 878 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 ADPRMQ3LIE5 342 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 HSP90AA5PQ58FG0 334 aa4.72□□□□□ -1.65
SPG11-208ENST00000558155 C10orf62Q5T681 223 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms