RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PIGGQ5H8A4 983 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 TCHHL1Q5QJ38 904 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 OR52E8Q6IFG1 317 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 IL20RBQ6UXL0 311 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 Q6ZPB1 254 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 COMMD6Q7Z4G1 85 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 TDRPQ86YL5 185 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 SLC22A9Q8IVM8 553 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 C9orf40Q8IXQ3 194 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 GPALPP1Q8IXQ4 340 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 CNPY4Q8N129 248 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 CDYL2Q8N8U2 506 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ZFP62Q8NB50 900 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 POGLUT1Q8NBL1 392 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 OR5L2Q8NGL0 311 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 C16orf52Q8NHV5 167 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 NUBPLQ8TB37 319 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 SELENOMQ8WWX9 145 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 FBXL20Q96IG2 436 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ZNF382Q96SR6 550 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 PELOQ9BRX2 385 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ELOVL6Q9H5J4 265 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ANKZF1Q9H8Y5 726 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 WDR41Q9HAD4 459 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 BRF2Q9HAW0 419 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 HPF1Q9NWY4 346 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 COPS7AQ9UBW8 275 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 DCDC2Q9UHG0 476 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 CES1P1Q9UKY3 287 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 SNX6Q9UNH7 406 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 SLC12A4Q9UP95 1085 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ERVK-11Q9UQG0 969 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 EXPH5Q8NEV8 1989 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 DCHS2Q6V1P9 2916 aa8.13□□□□□ -1.11
SNRPA1-206ENST00000558059 LRBAP50851 2863 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PHF3Q92576 2039 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 A0A0G2JMM0 328 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 A0A1W2PPB8 328 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 A0A1W2PRS3 328 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ARHGAP10A1A4S6 786 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PINLYPA6NC86 204 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 KIR3DP1A8MWS1 328 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 G3V2L1 256 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CCL21O00585 134 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ZNHIT1O43257 154 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 DYRK3O43781 588 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 OR10H2O60403 315 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 NADKO95544 446 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 MLYCDO95822 493 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PROCP04070 461 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CHN1P15882 459 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ZNF24P17028 368 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PTGER1P34995 402 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 RFC3P40938 356 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 SLCO1A2P46721 670 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 SLC37A1P57057 533 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 GPR85P60893 370 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ERVK-8P63133 956 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 HSF1Q00613 529 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ASPHQ12797 758 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ZNF267Q14586 743 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 RASA2Q15283 850 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 C3AR1Q16581 482 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CCNYL2Q5T2Q4 361 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PAGE2Q7Z2X7 111 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 FGD2Q7Z6J4 655 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 SPPL2CQ8IUH8 684 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 MMP21Q8N119 569 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PSD4Q8NDX1 1056 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CHTF18Q8WVB6 975 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 UBLCP1Q8WVY7 318 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 RIT1Q92963 219 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 TM4SF18Q96CE8 201 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CCDC120Q96HB5 630 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ART5Q96L15 291 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 HBEGFQ99075 208 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CNPPD1Q9BV87 410 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 GSTO2Q9H4Y5 243 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CXorf21Q9HAI6 301 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 SH2D2AQ9NP31 389 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
SNRPA1-206ENST00000558059 INTS1Q8N201 2190 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 MED12Q93074 2177 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 APCP25054 2843 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 UBFD1O14562 309 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 HS6ST1O60243 411 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 PLIN3O60664 434 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 GLRA3O75311 464 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 ULK1O75385 1050 aa8.11□□□□□ -1.11
SNRPA1-206ENST00000558059 KRT6AP02538 564 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms