RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MDFICQ9P1T7 246 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ENOPH1Q9UHY7 261 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ERRFI1Q9UJM3 462 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 PILRBQ9UKJ0 227 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CHKBQ9Y259 395 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SH3GLB1Q9Y371 365 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 HEY1Q9Y5J3 304 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF608Q9ULD9 1512 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PLB1Q6P1J6 1458 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MRC2Q9UBG0 1479 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KIF24Q5T7B8 1368 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ANKRD30BQ9BXX2 1392 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C15orf38-AP3S2A0A0A6YYH1 394 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 A0A0U1RQK1 487 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 A0A1W2PPW3 197 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TTC26A0AVF1 554 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MEX3AA1L020 520 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 BCLAF3A2AJT9 711 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF320A2RRD8 509 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SLC15A5A6NIM6 579 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRAPPC3O43617 180 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RANBP6O60518 1105 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CSDE1O75534 798 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SEMA3DO95025 777 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 FGF19O95750 216 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GNA14O95837 355 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 OPN1LWP04000 364 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KRT8P05787 483 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KIR3DL2P43630 455 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 STARP49675 285 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PEX3P56589 373 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ST8SIA6P61647 398 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 VBP1P61758 197 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CSNK2BP67870 215 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 IRX4P78413 519 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PMP22Q01453 160 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GABPAQ06546 454 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 XRCC4Q13426 336 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CUL1Q13616 776 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 EFTUD2Q15029 972 aaKnown RBP eCLIP1.49□□□□□ -2.173e-7■■■■□ 24.9
HIF1A-212ENST00000557538 KRT31Q15323 416 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KYAT1Q16773 422 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF674Q2M3X9 581 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 FAM76BQ5HYJ3 339 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SPECC1LQ69YQ0 1117 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CAVIN1Q6NZI2 390 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRIM65Q6PJ69 517 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 BHLHA15Q7RTS1 189 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PRSS42Q7Z5A4 293 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ADCK1Q86TW2 530 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC6Q86X45 466 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF677Q86XU0 584 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PSTKQ8IV42 348 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 FAM219AQ8IW50 185 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NATD1Q8N6N6 113 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C10orf53Q8N6V4 93 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C8orf46Q8TAG6 207 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SETD7Q8WTS6 366 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LITAFQ99732 161 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 DHRS9Q9BPW9 319 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 FUCA2Q9BTY2 467 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 EDEM2Q9BV94 578 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KATNB1Q9BVA0 655 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KRTAP2-2Q9BYT5 123 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 POTEKPQ9BYX7 375 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SHCBP1LQ9BZQ2 653 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 EGLN3Q9H6Z9 239 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SP140LQ9H930 580 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MED20Q9H944 212 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PRMT8Q9NR22 394 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ELOVL2Q9NXB9 296 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ACTR3BQ9P1U1 418 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 HOOK1Q9UJC3 728 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KCNJ14Q9UNX9 436 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 WIPI2Q9Y4P8 454 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC42Q9Y546 428 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MAB21L2Q9Y586 359 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ATP6V1DQ9Y5K8 247 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 POMT1Q9Y6A1 747 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RFX7Q2KHR2 1363 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SCN5AQ14524 2016 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ATP8B3O60423 1300 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NPHP3Q7Z494 1330 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 A0A087X002 238 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 HSBP1L1C9JCN9 74 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 DDX39AO00148 427 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRAFD1O14545 582 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ARPC1BO15143 372 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CDK14O94921 469 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 AMBPP02760 352 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KRT19P08727 400 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ALOX5P09917 674 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC192P0DO97 292 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 COX5BP10606 129 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PRPS2P11908 318 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 S100A1P23297 94 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 OXTRP30559 389 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 BMI1P35226 326 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SPAM1P38567 509 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SERPINB8P50452 374 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms