RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 RNF111Q6ZNA4 994 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 VWA5B2Q8N398 1253 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 OR7G3Q8NG95 312 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 DIO2Q92813 273 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
SLIRP-210ENST00000557431 FBXL20Q96IG2 436 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 CD244Q9BZW8 370 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 POPDC3Q9HBV1 291 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 CAMK2AQ9UQM7 478 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 RTTNQ86VV8 2226 aa12.92□□□□□ -0.34
SLIRP-210ENST00000557431 HSPB2A8KAH6 182 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 E7ESA3 106 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 DVL2O14641 736 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 GBAP04062 536 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 S100BP04271 92 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 FBXO45P0C2W1 286 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 CT62P0C5K7 136 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 DRD2P14416 443 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 CEACAM8P31997 349 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 SOX18P35713 384 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 RAP1GDS1P52306 607 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 RPS13P62277 151 aaKnown RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 POU4F1Q01851 419 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 LAPTM5Q13571 262 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 HSPB2Q16082 182 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 EIPR1Q53HC9 387 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 FAM219BQ5XKK7 198 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 LRRC70Q7Z2Q7 622 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 LAS2Q8IYD9 372 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 SRFBP1Q8NEF9 429 aaKnown RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 HUS1BQ8NHY5 278 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 RBM18Q96H35 190 aaKnown RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 ZNF597Q96LX8 424 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 TRIB1Q96RU8 372 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
SLIRP-210ENST00000557431 GPR22Q99680 433 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 RBBP8Q99708 897 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 TIMP4Q99727 224 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 ROGDIQ9GZN7 287 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 DPH5Q9H2P9 285 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 ACKR4Q9NPB9 350 aa12.91□□□□□ -0.34
SLIRP-210ENST00000557431 FN1P02751 2386 aaKnown RBP12.9□□□□□ -0.34
SLIRP-210ENST00000557431 IQANK1A0A1B0GTG1 560 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 A0A1W2PPR1 153 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 SYNDIG1LA6NDD5 238 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 EFCAB8A8MWE9 144 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 EEF1E1-BLOC1S5C9J1V9 151 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 CES2O00748 559 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 GNB5O14775 395 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 EEF1E1O43324 174 aaKnown RBP12.9□□□□□ -0.34
SLIRP-210ENST00000557431 TMPRSS11DO60235 418 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 OR10H2O60403 315 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 TRIM3O75382 744 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-210ENST00000557431 ATE1O95260 518 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 EPPINO95925 133 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 STMN1P16949 149 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 SLC37A1P57057 533 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 TOMM20Q15388 145 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 TBCCQ15814 346 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 NNATQ16517 81 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 NTRK2Q16620 822 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 WIPI1Q5MNZ9 446 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-210ENST00000557431 DEPDC1Q5TB30 811 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 FNDC7Q5VTL7 733 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 CHSY3Q70JA7 882 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 GPR180Q86V85 440 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 ART5Q96L15 291 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 RILPQ96NA2 401 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 GNRHR2Q96P88 292 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 ZNF717Q9BY31 904 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-210ENST00000557431 SAYSD1Q9NPB0 183 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 OPTCQ9UBM4 332 aa12.9□□□□□ -0.34
SLIRP-210ENST00000557431 PRR14LQ5THK1 2151 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 A0A1W2PR48 441 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 AIFM1O95831 613 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 C1QAP02745 245 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 RAF1P04049 648 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 SERPINB3P29508 390 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 CASP2P42575 452 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 SLCO1A2P46721 670 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 ATP6V0D1P61421 351 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 IRF9Q00978 393 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 LTBQ06643 244 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 KEAP1Q14145 624 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 E2F2Q14209 437 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-210ENST00000557431 DEFB113Q30KQ7 82 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 TMEM35AQ53FP2 167 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 TMEM198Q66K66 360 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms