RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TNFP01375 233 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 FDPSP14324 419 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 GJB2P29033 226 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CHRNA3P32297 505 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CASP4P49662 377 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 TKTL1P51854 596 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 ZFP36L1Q07352 338 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 IL17AQ16552 155 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 KRTAP24-1Q3LI83 254 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CEP85LQ5SZL2 805 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CLEC20AQ6ZU45 233 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 ABI3BPQ7Z7G0 1075 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 SDCCAG8Q86SQ7 713 aaPredicted RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 CCDC190Q86UF4 302 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 WDR49Q8IV35 697 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 UNC45BQ8IWX7 931 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 LGI2Q8N0V4 545 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 SIX6OS1Q8N1H7 587 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 TTC30BQ8N4P2 665 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 HJURPQ8NCD3 748 aaPredicted RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 PPFIBP2Q8ND30 876 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 OR8K5Q8NH50 307 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 SNRNP40Q96DI7 357 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 STAMBPL1Q96FJ0 436 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 MPP4Q96JB8 637 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 C17orf77Q96MU5 243 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 DDX50Q9BQ39 737 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 RBM4Q9BWF3 364 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 PANK2Q9BZ23 570 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 EDEM3Q9BZQ6 932 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 ILKAPQ9H0C8 392 aaPredicted RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 IL37Q9NZH6 218 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 RCC2Q9P258 522 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 SH3BGRL2Q9UJC5 107 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 VPS28Q9UK41 221 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 FAF1Q9UNN5 650 aaPredicted RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 EXO1Q9UQ84 846 aaKnown RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 CLIC4Q9Y696 253 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 STYXL1Q9Y6J8 313 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 RPS6KL1Q9Y6S9 549 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 A0A0G2JNG1 304 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 IGHV5-10-1A0A0J9YXX1 117 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 A0A1W2PP11 408 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 C1orf226A1L170 272 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 FAM92AA1XBS5 289 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 BLOC1S5-TXNDC5H3BN57 136 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 POLR1CO15160 346 aaPredicted RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 OGG1O15527 345 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 B4GAT1O43505 415 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 ACSL4O60488 711 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 DPM1O60762 260 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 STK17BO94768 372 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 REC8O95072 547 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TUBBP07437 444 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 ATP1A3P13637 1013 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 CD1EP15812 388 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 HTR1EP28566 365 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TIMP3P35625 211 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 PPARGP37231 505 aaPredicted RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 VEGFCP49767 419 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 GPR143P51810 404 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 MAZP56270 477 aaKnown RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 EVCP57679 992 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 ISL1P61371 349 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TUBB4BP68371 445 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 POU5F1Q01860 360 aaKnown RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 SULT2A1Q06520 285 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 KIR2DS5Q14953 304 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 SNRNP35Q16560 246 aaKnown RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 MRGPRG-AS1Q2M3A8 158 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 LRRC73Q5JTD7 316 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TPRG1LQ5T0D9 272 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 PIP5KL1Q5T9C9 394 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 BSPRYQ5W0U4 402 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 SPOPLQ6IQ16 392 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 NEK5Q6P3R8 708 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 ERN2Q76MJ5 926 aaKnown RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 MARK2Q7KZI7 788 aaKnown RBP3.49□□□□□ -1.85
CHD8-212ENST00000557329 CCDC186Q7Z3E2 898 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 CEP97Q8IW35 865 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 NELFCDQ8IXH7 590 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 GPALPP1Q8IXQ4 340 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 IQCKQ8N0W5 287 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 FBXL16Q8N461 479 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 C4orf32Q8N8J7 132 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 OR10V1Q8NGI7 309 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 OR52I2Q8NH67 350 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 FAM76AQ8TAV0 307 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 CXorf40AQ8TE69 158 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TM9SF4Q92544 642 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 RAD54LQ92698 747 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 RHBDF1Q96CC6 855 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 HDAC11Q96DB2 347 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 PPP1R16AQ96I34 528 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 C1orf74Q96LT6 269 aa3.49□□□□□ -1.85
CHD8-212ENST00000557329 TIGD1Q96MW7 591 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms