RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GBX1Q14549 363 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 ITPRIPL2Q3MIP1 535 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 KLHL12Q53G59 568 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 KIAA1161Q6NSJ0 714 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 B3GLCTQ6Y288 498 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC22A16Q86VW1 577 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 SETD7Q8WTS6 366 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 SGPP1Q9BX95 441 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC35C2Q9NQQ7 365 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CLDND1Q9NY35 253 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CNIH4Q9P003 139 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 NCKAP1Q9Y2A7 1128 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CAB39Q9Y376 341 aaPredicted RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CLCA1A8K7I4 914 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 KLF8O95600 359 aaPredicted RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 ITGAMP11215 1152 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 PVRP15151 417 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CHMP24386 653 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 PIK3CBP42338 1070 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 GABARAPL2P60520 117 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 LSM11P83369 360 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■■■■□ 22.3
TMEM55B-207ENST00000557041 TGM3Q08188 693 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 FCHO2Q0JRZ9 810 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 LTB4RQ15722 352 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 C11orf91Q3C1V1 193 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF311Q5JNZ3 666 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 LAIR2Q6ISS4 152 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 USP30Q70CQ3 517 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 OR9A2Q8NGT5 310 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 FGF14Q92915 247 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 MGLLQ99685 303 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 PLA2G2FQ9BZM2 168 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 NEUROD4Q9HD90 331 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 STARD5Q9NSY2 213 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 DDX28Q9NUL7 540 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 C14orf119Q9NWQ9 140 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 MALT1Q9UDY8 824 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC27A6Q9Y2P4 619 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 ATG4BQ9Y4P1 393 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 HOXC11O43248 304 aaPredicted RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 ENTPD6O75354 484 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 MED26O95402 600 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 MYL12AP19105 171 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 NT5EP21589 574 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CPN2P22792 545 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 GGT2P36268 569 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 KEAP1Q14145 624 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 LIPKQ5VXJ0 399 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 PRSS48Q7RTY5 328 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CCDC71Q8IV32 467 aaPredicted RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 IPCEF1Q8WWN9 437 aaPredicted RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 C1QTNF7Q9BXJ2 289 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 NDRG4Q9ULP0 352 aaKnown RBP14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 CHD9Q3L8U1 2897 aa14.54□□□□□ -0.08
TMEM55B-207ENST00000557041 FOXE1O00358 373 aaPredicted RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 SNX4O95219 450 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 CMPK1P30085 196 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 RBBP4Q09028 425 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 GINS1Q14691 196 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 FXNQ16595 210 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 C6orf132Q5T0Z8 1188 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC35F1Q5T1Q4 408 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF776Q68DI1 518 aaPredicted RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 FRMPD2BQ6IN97 320 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ZC3H14Q6PJT7 736 aaKnown RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 UNC5DQ6UXZ4 953 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 PLEKHM3Q6ZWE6 761 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ACOT4Q8N9L9 421 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 DRAXINQ8NBI3 349 aaPredicted RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC38A4Q969I6 547 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 C1orf226A1L170 272 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 WBP4O75554 376 aaKnown RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 IL1RNP18510 177 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 RHCEP18577 417 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 CSNK2A2P19784 350 aaPredicted RBP14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 HYAL2Q12891 473 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 NNATQ16517 81 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 CCNJQ5T5M9 372 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 MFSD4BQ5TF39 518 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 MS4A8Q9BY19 250 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ALOXE3Q9BYJ1 711 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 NKX2-4Q9H2Z4 354 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 SFXN1Q9H9B4 322 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ATP6V1HQ9UI12 483 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 CARD8Q9Y2G2 431 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ANAPC1Q9H1A4 1944 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 NPIPA5A0A0B4J1W7 369 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 NPIPA7E9PJI5 369 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 AP3D1O14617 1153 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 CBFA2T3O75081 653 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 APOA1P02647 267 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 NPIPA8P0DM63 369 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ARAFP10398 606 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 EPHA5P54756 1037 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 DEFB110Q30KQ9 67 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 LCTLQ6UWM7 567 aa14.53□□□□□ -0.08
TMEM55B-207ENST00000557041 ADGRF3Q8IZF5 1079 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms