RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 HMGCS1Q01581 520 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 GALNT1Q10472 559 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-207ENST00000556831 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
SLIRP-207ENST00000556831 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 NR6A1Q15406 480 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 CYP4Z2PQ8N1L4 340 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 OR8K3Q8NH51 312 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 PPWD1Q96BP3 646 aaKnown RBP13.11□□□□□ -0.31
SLIRP-207ENST00000556831 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 ZIM3Q96PE6 472 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 NPAS2Q99743 824 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 HPF1Q9NWY4 346 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 UTP20O75691 2785 aaKnown RBP13.11□□□□□ -0.31
SLIRP-207ENST00000556831 ANKUB1A6NFN9 424 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 UBFD1O14562 309 aaKnown RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 AZIN1O14977 448 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 NPHS1O60500 1241 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 DDAH2O95865 285 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 ANXA4P09525 319 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 PORP16435 677 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 NT5EP21589 574 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GNLYP22749 145 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 HLCSP50747 726 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GPR143P51810 404 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 XKP51811 444 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 ERVK-8P63133 956 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 RNF4P78317 190 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF267Q14586 743 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SPRED3Q2MJR0 410 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 HLA-DQA1Q5Y7H0 255 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SLC48A1Q6P1K1 146 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GPALPP1Q8IXQ4 340 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SAMD14Q8IZD0 417 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GOLGA6L1Q8N7Z2 621 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 CHTF18Q8WVB6 975 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 FAR1Q8WVX9 515 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SENP5Q96HI0 755 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GAL3ST4Q96RP7 486 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 MECRQ9BV79 373 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 GATA5Q9BWX5 397 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 MIEF1Q9NQG6 463 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 MYOTQ9UBF9 498 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 ENTPD4Q9Y227 616 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 KLF13Q9Y2Y9 288 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 PCDHA9Q9Y5H5 950 aa13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SETD2Q9BYW2 2564 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-207ENST00000556831 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 OR6C76A6NM76 312 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 TCP11X1B4DZS4 312 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 WWP2O00308 870 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 SLC28A1O00337 649 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 PGRMC2O15173 223 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 TM9SF1O15321 606 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 OR2J2O76002 312 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 SP1P08047 785 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 EDN3P14138 238 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 CPMP14384 443 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 DRD2P14416 443 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 CHN1P15882 459 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 CSNK2A2P19784 350 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-207ENST00000556831 SERPINB3P29508 390 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 GALNSP34059 522 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 TRHRP34981 398 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-207ENST00000556831 FOXA1P55317 472 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF763Q0D2J5 394 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 OPN5Q6U736 354 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-207ENST00000556831 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 DDIASQ8IXT1 998 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 MDS2Q8NDY4 140 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 APIPQ96GX9 242 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 EBPLQ9BY08 206 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 BRINP2Q9C0B6 783 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 SSU72Q9NP77 194 aaKnown RBP13.09□□□□□ -0.31
SLIRP-207ENST00000556831 TIMMDC1Q9NPL8 285 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 UTS2RQ9UKP6 389 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 DLGAP4Q9Y2H0 992 aa13.09□□□□□ -0.31
SLIRP-207ENST00000556831 KLRC4-KLRK1H3BQV0 150 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 SEC22BO75396 215 aa13.08□□□□□ -0.32
SLIRP-207ENST00000556831 ZWINTO95229 277 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms