RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 WBP11Q9Y2W2 641 aaKnown RBP22.88■■□□□ 1.25
SDR39U1-221ENST00000556707 MAN1A2O60476 641 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 SKAP2O75563 359 aaPredicted RBP22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 ERAL1O75616 437 aaKnown RBP22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 ZFAND5O76080 213 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 MLF1P58340 268 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 BEST3Q8N1M1 668 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF321PQ8N8H1 164 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 RIT1Q92963 219 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 FBXL20Q96IG2 436 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 ART5Q96L15 291 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 PFDN4Q9NQP4 134 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 ABI3Q9P2A4 366 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 COPS7AQ9UBW8 275 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 TMED5Q9Y3A6 229 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 SVILO95425 2214 aa22.87■■□□□ 1.25
SDR39U1-221ENST00000556707 HMGB1P1B2RPK0 211 aaPredicted RBP22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 SORBS2O94875 1100 aaKnown RBP22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 IGKV3-11P04433 115 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 RPL14P50914 215 aaKnown RBP22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF750Q32MQ0 723 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 GALNTL6Q49A17 601 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 RFTN2Q52LD8 501 aaPredicted RBP22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 FAM71E1Q6IPT2 247 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 HSDL2Q6YN16 418 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF605Q86T29 641 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 TRIM42Q8IWZ5 723 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 Q8NA96 180 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 CDC26Q8NHZ8 85 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 RAB3IL1Q8TBN0 382 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 PPP3R2Q96LZ3 170 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 C3orf30Q96M34 536 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 CXorf21Q9HAI6 301 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 SLAMF7Q9NQ25 335 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 EHD3Q9NZN3 535 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 UTS2RQ9UKP6 389 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 SHANK1Q9Y566 2161 aa22.86■■□□□ 1.25
SDR39U1-221ENST00000556707 CDK2AP1O14519 115 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 SLC28A2O43868 658 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 PRKNO60260 465 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 F10P00742 488 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 CSNK2A2P19784 350 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 FEN1P39748 380 aaKnown RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 TNFSF10P50591 281 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 ERVK-8P63133 956 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 RPL38P63173 70 aaKnown RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 C2orf80Q0P641 193 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF267Q14586 743 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 TLR1Q15399 786 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 IKBIPQ70UQ0 350 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 CATSPER1Q8NEC5 780 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 OR8K3Q8NH51 312 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 DOK4Q8TEW6 326 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 THAP3Q8WTV1 239 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 CNRIP1Q96F85 164 aaPredicted RBP22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF681Q96N22 645 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 CNPPD1Q9BV87 410 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 EPN3Q9H201 632 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 THAP1Q9NVV9 213 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 LUZP4Q9P127 313 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 ERVK-19Q9WJR5 959 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF780BQ9Y6R6 833 aa22.85■■□□□ 1.25
SDR39U1-221ENST00000556707 HELZ2Q9BYK8 2649 aaKnown RBP22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 OR5H15A6NDH6 313 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 GABRR3A8MPY1 467 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 HRKO00198 91 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 SNNO75324 88 aaPredicted RBP22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 DDCP20711 480 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 TACR1P25103 407 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF169Q14929 603 aaPredicted RBP22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 ATG16L1Q676U5 607 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 GALNT12Q8IXK2 581 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 SAMD14Q8IZD0 417 aaPredicted RBP22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 C19orf60Q96EN9 201 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 MANSC1Q9H8J5 431 aa22.84■■□□□ 1.25
SDR39U1-221ENST00000556707 ATP6AP2A0A1C7CYW4 349 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 TMEM200CA6NKL6 621 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 FCHO1O14526 889 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 PEX11AO75192 247 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 ATP6AP2O75787 350 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 ATP1B1P05026 303 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 JUNP05412 331 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 SDC1P18827 310 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 NT5EP21589 574 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 RNF4P78317 190 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 PDCD2Q16342 344 aaPredicted RBP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 ATP6AP1LQ52LC2 224 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 FAM180BQ6P0A1 224 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 EXOSC8Q96B26 276 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 EGLN2Q96KS0 407 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 UTP23Q9BRU9 249 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 SLC35C2Q9NQQ7 365 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 ZNF446Q9NWS9 450 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 GIMAP2Q9UG22 337 aa22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 EXO1Q9UQ84 846 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-221ENST00000556707 UQCRHLA0A096LP55 91 aa22.82■■□□□ 1.24
SDR39U1-221ENST00000556707 TRAV17A0A0B4J275 112 aa22.82■■□□□ 1.24
SDR39U1-221ENST00000556707 TTLL8A6PVC2 850 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms