RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IFT80Q9P2H3 777 aaPredicted RBP17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 ENTPD2Q9Y5L3 495 aa17.29■□□□□ 0.36
SDR39U1-220ENST00000556548 H0YAE9 185 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 TFPTP0C1Z6 253 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 NR2F6P10588 404 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 CYP4B1P13584 511 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 CPN2P22792 545 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 ELK4P28324 431 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 TSFMP43897 325 aaKnown RBP17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 VSX2P58304 361 aaPredicted RBP17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 SIM1P81133 766 aaPredicted RBP17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 APOFQ13790 326 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 SUZ12Q15022 739 aaKnown RBP17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 MLC1Q15049 377 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 IFI44LQ53G44 452 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 ARMC6Q6NXE6 501 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 PIWIL3Q7Z3Z3 882 aaKnown RBP17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 KAT2AQ92830 837 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 EXD2Q9NVH0 621 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF451Q9Y4E5 1061 aa17.28■□□□□ 0.36
SDR39U1-220ENST00000556548 PRAMEF27A3QJZ7 478 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 ST6GAL1P15907 406 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 MATN1P21941 496 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 BCKDHBP21953 392 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 IGFBP5P24593 272 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 LASP1Q14847 261 aaKnown RBP17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 MAPK11Q15759 364 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 CAMKVQ8NCB2 501 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF555Q8NEP9 628 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 ZFP28Q8NHY6 868 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 PSMA8Q8TAA3 256 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 DOK4Q8TEW6 326 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 KLHL6Q8WZ60 621 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 FAM60AQ9NP50 221 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 EQTNQ9NQ60 294 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 LYARQ9NX58 379 aaKnown RBP17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 PADI2Q9Y2J8 665 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF780BQ9Y6R6 833 aa17.27■□□□□ 0.36
SDR39U1-220ENST00000556548 SLC28A2O43868 658 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 CSNK2A2P19784 350 aaPredicted RBP17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 FPR1P21462 350 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 FUT4P22083 530 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 MC3RP41968 323 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 RPL5P46777 297 aaKnown RBP17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 CSNK1EP49674 416 aaKnown RBP17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 ARFIP1P53367 373 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 TPD52P55327 224 aaPredicted RBP17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 DEFB133Q30KQ1 61 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 NADK2Q4G0N4 442 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 PJA1Q8NG27 643 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 C16orf58Q96GQ5 468 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 RIBC2Q9H4K1 309 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 A4GALTQ9NPC4 353 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 ORC6Q9Y5N6 252 aa17.27■□□□□ 0.35
SDR39U1-220ENST00000556548 B4GAT1O43505 415 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 LIM2P55344 173 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 RACK1P63244 317 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ID2Q02363 134 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ELOCQ15369 112 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 WDR53Q7Z5U6 358 aaPredicted RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ARL14Q8N4G2 192 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SPEM1Q8N4L4 309 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ATG16L2Q8NAA4 619 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 OR5T3Q8NGG3 340 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 RSPO3Q9BXY4 272 aaPredicted RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ING2Q9H160 280 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SEMA3GQ9NS98 782 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 GIMAP4Q9NUV9 329 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 KCMF1Q9P0J7 381 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 KIF17Q9P2E2 1029 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 C3orf18Q9UK00 162 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 B3GALT2O43825 422 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 HMGN2P05204 90 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SMIM10L1P0DMW3 83 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 NME1P15531 152 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 CDH3P22223 829 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 MPIP34949 423 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 BUD31P41223 144 aaPredicted RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 CLCN2P51788 898 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ZP2Q05996 745 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 DMWDQ09019 674 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 GANABQ14697 944 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ABHD13Q7L211 337 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SMIM10Q96HG1 83 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF681Q96N22 645 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 SERINC2Q96SA4 455 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 NELL2Q99435 816 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 RHCGQ9UBD6 479 aa17.26■□□□□ 0.35
SDR39U1-220ENST00000556548 LOC100130705A0A1B0GUX0 176 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 URADA6NGE7 173 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 UBXN7O94888 489 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 IFNA14P01570 189 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 ALOX12P18054 663 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 CDH12P55289 794 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 SPIBQ01892 262 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 TNFRSF17Q02223 184 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms