RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 WDR1O75083 606 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SH3BGRLO75368 114 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SIX3O95343 332 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SNRPB2P08579 225 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 ACVR2AP27037 513 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SERPINB3P29508 390 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 MAGEA5P43359 124 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC10A1Q14973 349 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 EBPQ15125 230 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 NTRK2Q16620 822 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 TBCELQ5QJ74 424 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 FRG2Q64ET8 278 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 RNF111Q6ZNA4 994 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 DGAT2L6Q6ZPD8 337 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 LRRC25Q8N386 305 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF441Q8N8Z8 693 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 C17orf47Q8NEP4 570 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 MYRIPQ8NFW9 859 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 TRPC4APQ8TEL6 797 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 CHTF18Q8WVB6 975 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 RIT1Q92963 219 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 TP53INP1Q96A56 240 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 PPWD1Q96BP3 646 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SARAFQ96BY9 339 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 FRG2BQ96QU4 278 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 SECISBP2Q96T21 854 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF703Q9H7S9 590 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 MCCC2Q9HCC0 563 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 ZFP64Q9NPA5 681 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 ACKR4Q9NPB9 350 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 TUBA8Q9NY65 449 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 CPSF2Q9P2I0 782 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 BOKQ9UMX3 212 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 CHCHD2Q9Y6H1 151 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 IKBKGQ9Y6K9 419 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 GTF3C1Q12789 2109 aa11.71□□□□□ -0.54
HNRNPC-221ENST00000555883 PCNX1Q96RV3 2341 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 LRRC14BA6NHZ5 514 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CAPN14A8MX76 684 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 NPIPA2E9PIF3 369 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 NPIPA3F8WFD2 350 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 HRKO00198 91 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 OR10H2O60403 315 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 KRT38O76015 456 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 TOXO94900 526 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 AIFM1O95831 613 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 INHBAP08476 426 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 GABRA1P14867 456 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 MSX1P28360 303 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 DNASE1L1P49184 302 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 MAN2A2P49641 1150 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CCNG1P51959 295 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 HERVK_113P63132 956 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 ERVK-8P63133 956 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 FUT7Q11130 342 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 TRAF3Q13114 568 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 UAP1Q16222 522 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 B3GNT6Q6ZMB0 384 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 MEX3BQ6ZN04 569 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PAGE2Q7Z2X7 111 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 TAGAPQ8N103 731 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CNPY4Q8N129 248 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PLD6Q8N2A8 252 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 C17orf53Q8N3J3 647 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 MMGT1Q8N4V1 131 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PTGR2Q8N8N7 351 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 OR5M3Q8NGP4 307 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 FMO2Q99518 471 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 TTYH2Q9BSA4 534 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CNPPD1Q9BV87 410 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 C1QTNF3Q9BXJ4 246 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 ERVK-6Q9BXR3 956 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 VPS11Q9H270 941 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CDC42EP4Q9H3Q1 356 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 NOL11Q9H8H0 719 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 CXorf21Q9HAI6 301 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 KCNJ16Q9NPI9 418 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PNPLA3Q9NST1 481 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 AHSPQ9NZD4 102 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PCTPQ9UKL6 214 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 ERVK-19Q9WJR5 959 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 PKDREJQ9NTG1 2253 aa11.7□□□□□ -0.54
HNRNPC-221ENST00000555883 TRGV5A0A0B4J1U4 118 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 G3V3Y1 287 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 SMIM24O75264 130 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 PRKRAO75569 313 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 CLPSP04118 112 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 RPS17P08708 135 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 PIGAP37287 484 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 TMED10P49755 219 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 NR0B1P51843 470 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 NEK2P51955 445 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 NUP107P57740 925 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 KCNJ2P63252 427 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 PMPCAQ10713 525 aa11.69□□□□□ -0.54
HNRNPC-221ENST00000555883 IFT88Q13099 833 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms