RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 COX15Q7KZN9 410 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ARHGAP24Q8N264 748 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 LRRC25Q8N386 305 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 NATD1Q8N6N6 113 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 OR8J3Q8NGG0 315 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ZFP90Q8TF47 636 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 KAT2AQ92830 837 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ECSITQ9BQ95 431 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 CPPED1Q9BRF8 314 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 SLC35A5Q9BS91 424 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 FBXO8Q9NRD0 319 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 PRTFDC1Q9NRG1 225 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 AKAP7Q9P0M2 348 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 CTSFQ9UBX1 484 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ZNF282Q9UDV7 671 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 PISDQ9UG56 409 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 B3GALT1Q9Y5Z6 326 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ZNF292O60281 2723 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 TEX51A0A1B0GUA7 166 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 FAM149AA5PLN7 773 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 TM4SF5O14894 197 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 DNAJA2O60884 412 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 CTNSO60931 367 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 BMP10O95393 424 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ZCCHC18P0CG32 403 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 PORP16435 677 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 ME2P23368 584 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 PPP2R1BP30154 601 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 CHI3L1P36222 383 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 GSK3BP49841 420 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 EFNA3P52797 238 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 LIMK1P53667 647 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 LRRC74AQ0VAA2 488 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 MINDY4Q4G0A6 757 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
SRP54-208ENST00000555557 NKAIN1Q4KMZ8 207 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 SAMD4BQ5PRF9 694 aaKnown RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 COX20Q5RI15 118 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.58□□□□□ -0.88
SRP54-208ENST00000555557 FAM199XQ6PEV8 388 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 DGAT2L6Q6ZPD8 337 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 SZRD1Q7Z422 152 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 SIMC1Q8NDZ2 872 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ZNF583Q96ND8 569 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 ALG2Q9H553 416 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 KAT8Q9H7Z6 458 aaKnown RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 CLK4Q9HAZ1 481 aaKnown RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 LANCL2Q9NS86 450 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 GPATCH2Q9NW75 528 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 EGFL7Q9UHF1 273 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 POMPQ9Y244 141 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 MRPS33Q9Y291 106 aaKnown RBP9.58□□□□□ -0.88
SRP54-208ENST00000555557 CLDN16Q9Y5I7 305 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 KNTC1P50748 2209 aa9.58□□□□□ -0.88
SRP54-208ENST00000555557 DCHS1Q96JQ0 3298 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 C15orf38-AP3S2A0A0A6YYH1 394 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 RNF103-CHMP3A0A140T963 221 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 B4E171 279 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 H0YHG0 523 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 MEN1O00255 615 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 CLDN4O14493 209 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 JMJD7P0C870 316 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 UQCRC2P22695 453 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 RORAP35398 523 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 SOX18P35713 384 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 TSPAN7P41732 249 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 MC3RP41968 323 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 CCT3P49368 545 aaKnown RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 PRKAG1P54619 331 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 RPS26P62854 115 aaKnown RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 DCDP81605 110 aaKnown RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 STX4Q12846 297 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 MLC1Q15049 377 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 SPDYE7PQ495Y7 208 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 FAM111BQ6SJ93 734 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 ARPINQ7Z6K5 226 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 RNF130Q86XS8 419 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 ZC3H7AQ8IWR0 971 aaKnown RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 ZNF595Q8IYB9 648 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 TRIML2Q8N7C3 387 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 HIPK4Q8NE63 616 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 ZFP28Q8NHY6 868 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 FAM120BQ96EK7 910 aaKnown RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 PTCHD1Q96NR3 888 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 DEPDC7Q96QD5 511 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 DPH2Q9BQC3 489 aaPredicted RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 ALOXE3Q9BYJ1 711 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 ULBP3Q9BZM4 244 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 DENND2DQ9H6A0 471 aaPredicted RBP9.57□□□□□ -0.88
SRP54-208ENST00000555557 NEUROD4Q9HD90 331 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 NECTIN3Q9NQS3 549 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 PRDM9Q9NQV7 894 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
SRP54-208ENST00000555557 EVPLLA8MZ36 301 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CPNE3O75131 537 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms