RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TRPV3Q8NET8 790 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 OR4F5Q8NH21 305 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 FBXO25Q8TCJ0 367 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 DEPDC1BQ8WUY9 529 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 ERP27Q96DN0 273 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 OR5M11Q96RB7 305 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 SERINC2Q96SA4 455 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 CCT8L2Q96SF2 557 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 SDHCQ99643 169 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-216ENST00000555550 SSX3Q99909 188 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 TTYH2Q9BSA4 534 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 GDF3Q9NR23 364 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 GIMAP2Q9UG22 337 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 FBXL5Q9UKA1 691 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 PLEKHA6Q9Y2H5 1048 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 TMEM129A0AVI4 362 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 OOEPA6NGQ2 149 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 SLC15A5A6NIM6 579 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 APBB3O95704 486 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 HSPA4LO95757 839 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 SNRPCP09234 159 aaKnown RBP2.63□□□□□ -1.99
SCFD1-216ENST00000555550 MAGEB1P43366 347 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 GABPAQ06546 454 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 ARHGAP1Q07960 439 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 MEF2DQ14814 521 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 OR1C1Q15619 314 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 MICAQ29983 383 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 C9orf129Q5T035 196 aaKnown RBP2.63□□□□□ -1.99
SCFD1-216ENST00000555550 DCLRE1AQ6PJP8 1040 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 APOOLQ6UXV4 268 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 GCNT7Q6ZNI0 430 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 FBXO16Q8IX29 292 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-216ENST00000555550 TUSC5Q8IXB3 177 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 KLHDC8AQ8IYD2 350 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 GGHQ92820 318 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 SNRNP40Q96DI7 357 aaKnown RBP2.63□□□□□ -1.99
SCFD1-216ENST00000555550 AGPAT1Q99943 283 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 CXXC4Q9H2H0 198 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 TUFT1Q9NNX1 390 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 IMPAD1Q9NX62 359 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 SEPT10Q9P0V9 454 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 PRODH2Q9UF12 536 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 MLXQ9UH92 298 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 TEKT2Q9UIF3 430 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 PSORS1C1Q9UIG5 152 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 ABCG2Q9UNQ0 655 aa2.63□□□□□ -1.99
SCFD1-216ENST00000555550 IGHV3OR16-12A0A075B7B8 117 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 FRG2CA6NGY1 282 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 SDR42E2A6NKP2 422 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 GLCEO94923 617 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 NUDT14O95848 222 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 GAS8O95995 478 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 GOT2P00505 430 aaKnown RBP2.62□□□□□ -1.99
SCFD1-216ENST00000555550 GH1P01241 217 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 SLC35E2P0CK97 266 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 MBL2P11226 248 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-216ENST00000555550 SCG2P13521 617 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 FRKP42685 505 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-216ENST00000555550 STX17P56962 302 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 RIPK4P57078 832 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 KCNK10P57789 538 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 HEPACAMQ14CZ8 416 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 ISXQ2M1V0 245 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 VSIG1Q86XK7 387 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 OR2L5Q8NG80 312 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 U2AF1L4Q8WU68 220 aaKnown RBP2.62□□□□□ -1.99
SCFD1-216ENST00000555550 CRYGNQ8WXF5 182 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 MR1Q95460 341 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 PNPLA2Q96AD5 504 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 FAF2Q96CS3 445 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 AP2M1Q96CW1 435 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 CASD1Q96PB1 797 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 S1PR3Q99500 378 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 TNMDQ9H2S6 317 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 ADGRL4Q9HBW9 690 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 SLC25A19Q9HC21 320 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 PLSCR3Q9NRY6 295 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 MOKQ9UQ07 419 aa2.62□□□□□ -1.99
SCFD1-216ENST00000555550 FAM149AA5PLN7 773 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 MEI4A8MW99 385 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 H0YIG0 161 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 EPOP01588 193 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 SBK2P0C263 348 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 P0C879 139 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 TPBGLP0DKB5 382 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 ELK1P19419 428 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 RPS6KA1Q15418 735 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 TGIF1Q15583 401 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 TRADDQ15628 312 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 NHSL2Q5HYW2 709 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 CCDC158Q5M9N0 1113 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 HOOK3Q86VS8 718 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 ATAD1Q8NBU5 361 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 LINC01006Q8NI28 216 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 SNRNP27Q8WVK2 155 aaKnown RBP2.61□□□□□ -1.99
SCFD1-216ENST00000555550 SPATA17Q96L03 361 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 Q9HAA7 133 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 MIS18AQ9NYP9 233 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 KLRF1Q9NZS2 232 aa2.61□□□□□ -1.99
SCFD1-216ENST00000555550 RAI14Q9P0K7 980 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms