RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 EEF1A2Q05639 463 aaKnown RBP10.23□□□□□ -0.77
SHMT2-218ENST00000555213 STX5Q13190 355 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 SERTAD2Q14140 314 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 HEPACAMQ14CZ8 416 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 COL28A1Q2UY09 1125 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 NDUFAF5Q5TEU4 345 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 REP15Q6BDI9 236 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 BORAQ6PGQ7 559 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 C19orf48Q6RUI8 117 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 TMEM205Q6UW68 189 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 DLEU7Q6UYE1 221 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 IKBIPQ70UQ0 350 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 SCUBE1Q8IWY4 988 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 PLPP5Q8NEB5 264 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 OR11G2Q8NGC1 345 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 CLHC1Q8NHS4 586 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 CDC26Q8NHZ8 85 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 APOBEC4Q8WW27 367 aaKnown RBP10.23□□□□□ -0.77
SHMT2-218ENST00000555213 TSLPQ969D9 159 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 SPDL1Q96EA4 605 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 TSSK3Q96PN8 268 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 GPATCH1Q9BRR8 931 aaKnown RBP10.23□□□□□ -0.77
SHMT2-218ENST00000555213 SLC25A23Q9BV35 468 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 PRORYQ9H606 182 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 EFCAB1Q9HAE3 211 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 TEX10Q9NXF1 929 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-218ENST00000555213 WBP11Q9Y2W2 641 aaKnown RBP10.23□□□□□ -0.77
SHMT2-218ENST00000555213 ATG4BQ9Y4P1 393 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 ASB4Q9Y574 426 aa10.23□□□□□ -0.77
SHMT2-218ENST00000555213 PTPRQQ9UMZ3 2332 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 LOC102723996A0A087X1L8 192 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 IGKV3D-11A0A0A0MRZ8 115 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 A0A1W2PQ72 361 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 A0A1W2PR48 441 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 TCRBV16S1A1N1A0A5B0 115 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 GABRR3A8MPY1 467 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 FXYD1O00168 92 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 SOCS6O14544 535 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 GYG2O15488 501 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 PROM1O43490 865 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 DYRK3O43781 588 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 SORBS2O94875 1100 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 IFNA16P05015 189 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 DRD2P14416 443 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 DDX5P17844 614 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 ALDH9A1P49189 494 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 RASSF2P50749 326 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 MNAT1P51948 309 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 OR4D2P58180 307 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 TAS2R50P59544 299 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 PLIN5Q00G26 463 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 RHDQ02161 417 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 AIMP2Q13155 320 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 BIKQ13323 160 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 SFT2D3Q587I9 215 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 COQ5Q5HYK3 327 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 DCAF10Q5QP82 559 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 C18orf63Q68DL7 685 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 FAM71E1Q6IPT2 247 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 KIRREL2Q6UWL6 708 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 HACD2Q6Y1H2 254 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 NDUFAF7Q7L592 441 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 CPEB2Q7Z5Q1 589 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 ANKRD37Q7Z713 158 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 TMEM132CQ8N3T6 1108 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 C16orf78Q8WTQ4 265 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 UCN3Q969E3 161 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 C8orf44Q96CB5 159 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 TM4SF18Q96CE8 201 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 COQ8BQ96D53 544 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 CLPTM1LQ96KA5 538 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 LPAR4Q99677 370 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 PELOQ9BRX2 385 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 DPY30Q9C005 99 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 MYNNQ9NPC7 610 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 SERHLQ9NQF3 203 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 MIEF1Q9NQG6 463 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 GIMAP4Q9NUV9 329 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 PSME2Q9UL46 239 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 NDUFAF1Q9Y375 327 aa10.22□□□□□ -0.77
SHMT2-218ENST00000555213 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.22□□□□□ -0.77
SHMT2-218ENST00000555213 NUP210LQ5VU65 1888 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 FRYQ5TBA9 3013 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 IGHV1-45A0A0A0MS14 117 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 CFAP73A6NFT4 308 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 GLOD5A6NK44 160 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 NR5A2O00482 541 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 OR10H2O60403 315 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 LRATO95237 230 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 IL3P08700 152 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 FURINP09958 794 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 COX6A1P12074 109 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ICAM2P13598 275 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 PCSK2P16519 638 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 HOXB9P17482 250 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-218ENST00000555213 PTPN6P29350 595 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 HPCAL1P37235 193 aa10.21□□□□□ -0.77
SHMT2-218ENST00000555213 ASMTP46597 345 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms