RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 IRF9Q00978 393 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 TNFRSF17Q02223 184 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 CALCOCO2Q13137 446 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 DDX39BQ13838 428 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 SPRED3Q2MJR0 410 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 PRAMEF20Q5VT98 475 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 LIPJQ5W064 366 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 CES4AQ5XG92 561 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ZDHHC24Q6UX98 284 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 RAPH1Q70E73 1250 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 MAATS1Q7Z4T9 603 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 FBXW8Q8N3Y1 598 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ZNF441Q8N8Z8 693 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 OR10G3Q8NGC4 313 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 WDR20Q8TBZ3 569 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 FBXO25Q8TCJ0 367 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 FBF1Q8TES7 1133 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 GPR78Q96P69 363 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ERVK-6Q9BXR3 956 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ZNF703Q9H7S9 590 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 DDX31Q9H8H2 851 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ZFP64Q9NPA5 681 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ACKR4Q9NPB9 350 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 ERVK-19Q9WJR5 959 aa11.24□□□□□ -0.61
MTHFD1-207ENST00000554677 FAM221AA4D161 298 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 GLOD5A6NK44 160 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 KDM4EB2RXH2 506 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 H0YIV9 168 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PGRMC2O15173 223 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 TRIM3O75382 744 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 C2P06681 752 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PTX3P26022 381 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PLTPP55058 493 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PLIN5Q00G26 463 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 C2orf54Q08AI8 447 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 SNTB1Q13884 538 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 ZNF267Q14586 743 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 SETDB1Q15047 1291 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 EBPQ15125 230 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 NTRK2Q16620 822 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 WLSQ5T9L3 541 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 RIPPLY2Q5TAB7 128 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 POMZP3Q6PJE2 187 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 TMEM64Q6YI46 380 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 TBC1D1Q86TI0 1168 aaPredicted RBP11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 RHEBL1Q8TAI7 183 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 NEIL3Q8TAT5 605 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 SLC22A8Q8TCC7 542 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 SLC6A15Q9H2J7 730 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 QPCTLQ9NXS2 382 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 ALKBH4Q9NXW9 302 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 CNIH4Q9P003 139 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PHF11Q9UIL8 331 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 ACOT9Q9Y305 439 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 PCDHGA11Q9Y5H2 935 aa11.23□□□□□ -0.61
MTHFD1-207ENST00000554677 IQANK1A0A1B0GTG1 560 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 SYT5O00445 386 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 CTAG2O75638 210 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 LRATO95237 230 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 FAM58BPP0C7Q3 252 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 GABRA1P14867 456 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 CD1EP15812 388 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 SERPINB3P29508 390 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 TLX1P31314 330 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 GALNSP34059 522 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 NEK2P51955 445 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 RAP1GDS1P52306 607 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ART1P52961 327 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 IST1P53990 364 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 TBL3Q12788 808 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 CUL3Q13618 768 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 PFKFB4Q16877 469 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 FNDC7Q5VTL7 733 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 BICRALQ6AI39 1079 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ARSKQ6UWY0 536 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ULK2Q8IYT8 1036 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 L3MBTL4Q8NA19 623 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 RIT1Q92963 219 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ART5Q96L15 291 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 LIME1Q9H400 295 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ZNF358Q9NW07 568 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 BOKQ9UMX3 212 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 RNF11Q9Y3C5 154 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 PCDHGB3Q9Y5G1 929 aa11.22□□□□□ -0.61
MTHFD1-207ENST00000554677 ANKRD33BA6NCL7 494 aa11.21□□□□□ -0.61
MTHFD1-207ENST00000554677 OR6C76A6NM76 312 aa11.21□□□□□ -0.61
MTHFD1-207ENST00000554677 FOXE1O00358 373 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms