RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KCNH6Q9H252 994 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 MKLN1Q9UL63 735 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 COPS3Q9UNS2 423 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 YJEFN3A6XGL0 299 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CEBPZOSA8MTT3 80 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 H3BUI4 141 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC16A3O15427 465 aaKnown RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SULT1C4O75897 302 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ERCC1P07992 297 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CHRM4P08173 479 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 OR12D1P0DN82 309 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NPY1RP25929 384 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CLCN5P51795 746 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TGFB2P61812 414 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 RALGPS1Q5JS13 557 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 LY6G5CQ5SRR4 150 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NT5DC1Q5TFE4 455 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 RABEPKQ7Z6M1 372 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 LRRC18Q8N456 261 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 DEFB123Q8N688 67 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TSPEARQ8WU66 669 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 KHSRPQ92945 711 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NXPE2Q96DL1 559 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ZBED3Q96IU2 234 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TXNRD2Q9NNW7 524 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NDUFAF4Q9P032 175 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ERVV-1B6SEH8 477 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PSMD10O75832 226 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NFATC1O95644 943 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 APOA2P02652 100 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ECI1P42126 302 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC22A10Q63ZE4 541 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NPEPL1Q8NDH3 523 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 FAM46BQ96A09 425 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 AGAP2Q99490 1192 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 RAB11FIP5Q9BXF6 653 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 HRASLSQ9HDD0 168 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ERVK13-1Q9NX77 482 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 EDARQ9UNE0 448 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PXDNLA1KZ92 1463 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SSU72P8A0A1W2PR75 194 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 IGLON5A6NGN9 336 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF705EA8MWA4 302 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CTSKP43235 329 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 QPCTQ16769 361 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 FIP1L1Q6UN15 594 aaKnown RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 HHIPL2Q6UWX4 724 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NANOGQ9H9S0 305 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TCF7L1Q9HCS4 588 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ABCD2Q9UBJ2 740 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PTGDR2Q9Y5Y4 395 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC15A5A6NIM6 579 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 DNAJA2O60884 412 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ADORA3P0DMS8 318 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 GPLD1P80108 840 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TFF2Q03403 129 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 COL21A1Q96P44 957 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC29A1Q99808 456 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TPT1P8Q9HAU6 139 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PRTFDC1Q9NRG1 225 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 MIOSQ9NXC5 875 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SH2B3Q9UQQ2 575 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 GPR75-ASB3A0A0A6YYF3 556 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 HAPLN1P10915 354 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 IL1RNP18510 177 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF81P51508 661 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NAA20P61599 178 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM69Q5SWH9 247 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CATSPERGQ6ZRH7 1159 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 LARP4Q71RC2 724 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TAS1R1Q7RTX1 841 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 RBFAQ8N0V3 343 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 IGDCC4Q8TDY8 1250 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 GOLT1BQ9Y3E0 138 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 KLF11O14901 512 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 RNF13O43567 381 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ECI2O75521 394 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SNRPCP09234 159 aaKnown RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PRKACGP22612 351 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 GRIA1P42261 906 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 NCS1P62166 190 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PITX1P78337 314 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CD83Q01151 205 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ASB15Q8WXK1 588 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SLC7A6Q92536 515 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ORAI3Q9BRQ5 295 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 POLE4Q9NR33 117 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 HEBP1Q9NRV9 189 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PLXNC1O60486 1568 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 EFCAB7A8K855 629 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 TP53P04637 393 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-212ENST00000554584 IL7RP16871 459 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PPP5CP53041 499 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PLCXD2Q0VAA5 305 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 CST9LP1Q5W188 147 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 AP3S1Q92572 193 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms