RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 KCPQ6ZWJ8 1503 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 MACROD2A1Z1Q3 448 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 OGTO15294 1046 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ZBTB14O43829 449 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ANPEPP15144 967 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 AREGP15514 252 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 GLRA1P23415 457 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 SLC12A3P55017 1021 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 PEX3P56589 373 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 KCNK10P57789 538 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 SRP54P61011 504 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 GABPAQ06546 454 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ITPK1Q13572 414 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 PKN2Q16513 984 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 KNOP1Q1ED39 458 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 DCAF12Q5T6F0 453 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ETFRF1Q6IPR1 90 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 CD164L2Q6UWJ8 174 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 LCLAT1Q6UWP7 414 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 B3GLCTQ6Y288 498 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ADAMTSL2Q86TH1 951 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 LRRTM1Q86UE6 522 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 OR4N5Q8IXE1 308 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 ZNF444Q8N0Y2 327 aaPredicted RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 Q8NBF4 154 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 CCNYQ8ND76 341 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 SPATA3Q8NHX4 192 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 GANCQ8TET4 914 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 GLYATL1Q969I3 302 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 PRICKLE1Q96MT3 831 aaPredicted RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 AGAP4Q96P64 663 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 OPRPNQ99935 248 aaPredicted RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 FGFBP2Q9BYJ0 223 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 WWP1Q9H0M0 922 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 VIPAS39Q9H9C1 493 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 KCNK13Q9HB14 408 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 MOSPD1Q9UJG1 213 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 STRAPQ9Y3F4 350 aaKnown RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 ZHX2Q9Y6X8 837 aa4.28□□□□□ -1.72
CHD8-207ENST00000554384 TNRC18O15417 2968 aaPredicted RBP4.28□□□□□ -1.72
CHD8-207ENST00000554384 GPRASP1Q5JY77 1395 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 KIF7Q2M1P5 1343 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 ARHGEF28Q8N1W1 1705 aaKnown RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 ATP7BP35670 1465 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 OR5H15A6NDH6 313 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 RNF103O00237 685 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 TNFSF12O43508 249 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 KRT86O43790 486 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 IDH3BO43837 385 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 REC8O95072 547 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 FGF19O95750 216 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 TXNDC12O95881 172 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 SLC4A1P02730 911 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 GSTA2P09210 222 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 TPBGLP0DKB5 382 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 CD1DP15813 335 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 FERP16591 822 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 CYP3A5P20815 502 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 FHITP49789 147 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 CCR4P51679 360 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 HNRNPFP52597 415 aaKnown RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 NDST2P52849 883 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 GSCP56915 257 aaPredicted RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 RBBP4Q09028 425 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 NFATC2Q13469 925 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 KRT81Q14533 505 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 CDC37Q16543 378 aaPredicted RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 TATDN1Q6P1N9 297 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 C3P1Q6ZMU1 363 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 ZNF730Q6ZMV8 503 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 SMIM5Q71RC9 77 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 METTL4Q8N3J2 472 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 CHCHD4Q8N4Q1 142 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 SSC4DQ8WTU2 575 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 UBE2Q2Q8WVN8 375 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 MRPL24Q96A35 216 aaKnown RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 ZNF599Q96NL3 588 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 FAM213AQ9BRX8 229 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 ZNF577Q9BSK1 485 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 UBE2TQ9NPD8 197 aaPredicted RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 PRMT8Q9NR22 394 aaPredicted RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 PIGVQ9NUD9 493 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 HMG20BQ9P0W2 317 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 UBQLN2Q9UHD9 624 aa4.27□□□□□ -1.73
CHD8-207ENST00000554384 RPH3AQ9Y2J0 694 aaPredicted RBP4.27□□□□□ -1.73
CHD8-207ENST00000554384 TOPAZ1Q8N9V7 1692 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 LOC105371242A0A075B767 164 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 SOCS3O14543 225 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 SNAP91O60641 907 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 MMP10P09238 476 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 DPEP1P16444 411 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 STMN1P16949 149 aa4.26□□□□□ -1.73
CHD8-207ENST00000554384 AHCYP23526 432 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms