RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ITGA10O75578 1167 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 OR4F21O95013 312 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 AIFM1O95831 613 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 DDAH2O95865 285 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 PDYNP01213 254 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 PROCP04070 461 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 ENO1P06733 434 aaKnown RBP12.15□□□□□ -0.46
SHMT2-211ENST00000554310 SP1P08047 785 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 NME2P22392 152 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 PKNOX1P55347 436 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 CSTF3Q12996 717 aaKnown RBP12.15□□□□□ -0.46
SHMT2-211ENST00000554310 EIF2S3LQ2VIR3 472 aaKnown RBP12.15□□□□□ -0.46
SHMT2-211ENST00000554310 SGO1Q5FBB7 561 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 C18orf63Q68DL7 685 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 SPINK14Q6IE38 97 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 COMMD6Q7Z4G1 85 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 GPALPP1Q8IXQ4 340 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-211ENST00000554310 METTL4Q8N3J2 472 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 TMEM125Q96AQ2 219 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 KLHL1Q9NR64 748 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 SLC12A4Q9UP95 1085 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 YARS2Q9Y2Z4 477 aaKnown RBP12.15□□□□□ -0.46
SHMT2-211ENST00000554310 MAST4O15021 2626 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 G3V2L1 256 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 MANBAO00462 879 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 PLIN3O60664 434 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SEMA7AO75326 666 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 GUCY1B2O75343 617 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 PRKRAO75569 313 aaKnown RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 ESRRBO95718 433 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 GPR75O95800 540 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 ALOX15P16050 662 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 HMOX2P30519 316 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SERPINB4P48594 390 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SSR4P51571 173 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 MAPK12P53778 367 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SPRED3Q2MJR0 410 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF468Q5VIY5 522 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SLC25A25Q6KCM7 469 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 FAM47EQ6ZV65 393 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 TRPM8Q7Z2W7 1104 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 CYP4Z2PQ8N1L4 340 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 TMEM156Q8N614 296 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 GBP7Q8N8V2 638 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 OR5L2Q8NGL0 311 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 RAB3IL1Q8TBN0 382 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 RBM18Q96H35 190 aaKnown RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 FBXL20Q96IG2 436 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 HES7Q9BYE0 225 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 GSTO2Q9H4Y5 243 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 FARSBQ9NSD9 589 aaKnown RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.476e-6■■□□□ 12.1
SHMT2-211ENST00000554310 TEX10Q9NXF1 929 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 MYOTQ9UBF9 498 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 ICE1Q9Y2F5 2266 aa12.14□□□□□ -0.47
SHMT2-211ENST00000554310 DIDO1Q9BTC0 2240 aaKnown RBP12.14□□□□□ -0.47
SHMT2-211ENST00000554310 MYOCOSA0A1B0GUC4 107 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 GLOD5A6NK44 160 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 ANKRD65E5RJM6 399 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 BIRC5O15392 142 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 PRKNO60260 465 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-211ENST00000554310 OR10H2O60403 315 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 ULK1O75385 1050 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 GBAP04062 536 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 IGKV3-11P04433 115 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 KLK1P06870 262 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 GALNSP34059 522 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 HK2P52789 917 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 DNAJB13P59910 316 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 RNF4P78317 190 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 PMP22Q01453 160 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 GALNT1Q10472 559 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-211ENST00000554310 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
SHMT2-211ENST00000554310 CCNYL2Q5T2Q4 361 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 NDUFAF5Q5TEU4 345 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF227Q86WZ6 799 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 NUBPLQ8TB37 319 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 METTL6Q8TCB7 284 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 ZNF721Q8TF20 911 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 AGAP11Q8TF27 550 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 FRMD6Q96NE9 622 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 HBEGFQ99075 208 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 KLF13Q9Y2Y9 288 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-211ENST00000554310 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
SHMT2-211ENST00000554310 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
SHMT2-211ENST00000554310 C1orf226A1L170 272 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms