RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 SYT10Q6XYQ8 523 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF572Q7Z3I7 529 aaPredicted RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 GOLGA7Q7Z5G4 137 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 CLYBLQ8N0X4 340 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 L3MBTL4Q8NA19 623 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 FAM13CQ8NE31 585 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 GAL3ST4Q96RP7 486 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 ERVK-6Q9BXR3 956 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 SH2D2AQ9NP31 389 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 SEMA4BQ9NPR2 832 aaPredicted RBP17.3■□□□□ 0.36
CPSF2-203ENST00000554290 ERVK-19Q9WJR5 959 aa17.3■□□□□ 0.36
CPSF2-203ENST00000554290 ADGRG4Q8IZF6 3080 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 A0A0A6YYD5 115 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 TRGV5A0A0B4J1U4 118 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 A0A1W2PR48 441 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 HMX2A2RU54 273 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 LRRC14BA6NHZ5 514 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 GLOD5A6NK44 160 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 FAM47E-STBD1D6RA91 191 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 TMPRSS11DO60235 418 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 CLDN9O95484 217 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 CELA3AP09093 270 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 FBXO45P0C2W1 286 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 GLI4P10075 376 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 GALNSP34059 522 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 BSGP35613 385 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 ARL1P40616 181 aaPredicted RBP17.29■□□□□ 0.36
CPSF2-203ENST00000554290 ZFP36L2P47974 494 aaKnown RBP17.29■□□□□ 0.36
CPSF2-203ENST00000554290 LYPD8Q6UX82 237 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 NUDT13Q86X67 352 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 DMRTC2Q8IXT2 367 aaPredicted RBP17.29■□□□□ 0.36
CPSF2-203ENST00000554290 WDR20Q8TBZ3 569 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 ATP6V1E2Q96A05 226 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 SERPINI1Q99574 410 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF717Q9BY31 904 aaPredicted RBP17.29■□□□□ 0.36
CPSF2-203ENST00000554290 WWTR1Q9GZV5 400 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 ZFP64Q9NPA5 681 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 QPCTLQ9NXS2 382 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 TNFRSF10DQ9UBN6 386 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 RNF11Q9Y3C5 154 aa17.29■□□□□ 0.36
CPSF2-203ENST00000554290 WASHC1A8K0Z3 465 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 SLC35E2P0CK97 266 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 GABRA1P14867 456 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 NEK2P51955 445 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 SLC37A1P57057 533 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 SLC7A5Q01650 507 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 CKAP4Q07065 602 aaKnown RBP17.28■□□□□ 0.36
CPSF2-203ENST00000554290 PRAMEF20Q5VT98 475 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 OR52E8Q6IFG1 317 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 C8orf74Q6P047 294 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 ADGRD1Q6QNK2 874 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 TAGAPQ8N103 731 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 FBXW8Q8N3Y1 598 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 MYRIPQ8NFW9 859 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 DOK4Q8TEW6 326 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 GPR78Q96P69 363 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF559Q9BR84 538 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 VPS11Q9H270 941 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 ALKBH4Q9NXW9 302 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 B4GALT7Q9UBV7 327 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 KCNN3Q9UGI6 736 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 FAM215AQ9Y5M1 114 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 CSMD1Q96PZ7 3565 aa17.28■□□□□ 0.36
CPSF2-203ENST00000554290 ESYT3A0FGR9 886 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 CAPN14A8MX76 684 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 TP53I11O14683 189 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 SIX3O95343 332 aaPredicted RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 AIFM1O95831 613 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 ALDOAP04075 364 aaKnown RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 RBP1P09455 135 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 PIK3R1P27986 724 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 EBPQ15125 230 aaKnown RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 C1orf185Q5T7R7 199 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 CES4AQ5XG92 561 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 HLA-DQA1Q5Y7H0 255 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 RTL6Q6ICC9 239 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 LRRC25Q8N386 305 aaPredicted RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 OR10G3Q8NGC4 313 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 JSRP1Q96MG2 331 aaPredicted RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 DOHHQ9BU89 302 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 ZNF703Q9H7S9 590 aaPredicted RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 NOL11Q9H8H0 719 aaKnown RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 ACKR4Q9NPB9 350 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 ZDHHC18Q9NUE0 388 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 TMCO1Q9UM00 188 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 PCDHGB3Q9Y5G1 929 aa17.27■□□□□ 0.36
CPSF2-203ENST00000554290 CHCHD2Q9Y6H1 151 aaPredicted RBP17.27■□□□□ 0.36
CPSF2-203ENST00000554290 C2orf92A0A1B0GVN3 265 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 SEMA3DO95025 777 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 GBAP04062 536 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 RFPL3SP0C7P2 107 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 CCNG1P51959 295 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 MYBPHQ13203 477 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 NTRK2Q16620 822 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TECRLQ5HYJ1 363 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TBCELQ5QJ74 424 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 C10orf62Q5T681 223 aaPredicted RBP17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TMEM198Q66K66 360 aa17.26■□□□□ 0.35
CPSF2-203ENST00000554290 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms