RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 APMAPQ9HDC9 416 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PRTFDC1Q9NRG1 225 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 LANCL2Q9NS86 450 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SIRT3Q9NTG7 399 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 NTMQ9P121 344 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PTGFRNQ9P2B2 879 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 TRPC4Q9UBN4 977 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 BCAP29Q9UHQ4 241 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ERVK-11Q9UQG0 969 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PCDHGA3Q9Y5H0 932 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 COL27A1Q8IZC6 1860 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 KNTC1P50748 2209 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 A0A087WV62 115 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 IGKV3D-11A0A0A0MRZ8 115 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 RNF103-CHMP3A0A140T963 221 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 FAM220BPB1ANY3 271 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 FAM227AF5H4B4 570 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 TM4SF5O14894 197 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 PLD2O14939 933 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 PLOD3O60568 738 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 LDB3O75112 727 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 PDE5AO76074 875 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 TIAF1O95411 115 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 STAMBPO95630 424 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 KLK3P07288 261 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CCL4P13236 92 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 EFNA1P20827 205 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 HTR1EP28566 365 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 GPC1P35052 558 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SOAT1P35610 550 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CHI3L1P36222 383 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 FEN1P39748 380 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 STT3AP46977 705 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OR1D4P47884 311 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CCT3P49368 545 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 GSK3BP49841 420 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 ANXA11P50995 505 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 ACTR3P61158 418 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OCA2Q04671 838 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 LIPEQ05469 1076 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 STX4Q12846 297 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SLC13A2Q13183 592 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SELPLGQ14242 412 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 MAP7Q14244 749 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 RGNQ15493 299 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SYT16Q17RD7 645 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SPDYE7PQ495Y7 208 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CCDC157Q569K6 752 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 DCAF12Q5T6F0 453 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 C1orf146Q5VVC0 180 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 FAM180BQ6P0A1 224 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 DHRS13Q6UX07 377 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 ZNF517Q6ZMY9 492 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 COX15Q7KZN9 410 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 RAB11FIP2Q7L804 512 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 TMPRSS12Q86WS5 348 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CALHM3Q86XJ0 350 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 ZC3H7AQ8IWR0 971 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 C10orf67Q8IYJ2 551 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CCDC116Q8IYX3 515 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OR2L13Q8N349 312 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 METTL27Q8N6F8 245 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 SLC38A9Q8NBW4 561 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OR2T12Q8NG77 320 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OR52N2Q8NGI0 321 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 OR9A2Q8NGT5 310 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 WDR36Q8NI36 951 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 JADE3Q92613 823 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 UCN3Q969E3 161 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 POP5Q969H6 163 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 ANKRD9Q96BM1 317 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 CTHRC1Q96CG8 243 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CCDC124Q96CT7 223 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 FAM120BQ96EK7 910 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 REXO5Q96IC2 774 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 ZNF583Q96ND8 569 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 TAAR9Q96RI9 348 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 KCTD14Q9BQ13 255 aaPredicted RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 ULBP3Q9BZM4 244 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 TRIM15Q9C019 465 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 FAM117AQ9C073 453 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CHST8Q9H2A9 424 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 IKZF5Q9H5V7 419 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 EPS8L2Q9H6S3 715 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 WDR54Q9H977 334 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 C3orf14Q9HBI5 128 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 THUMPD1Q9NXG2 353 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 SLC39A1Q9NY26 324 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 MAGEL2Q9UJ55 1249 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 NXT1Q9UKK6 140 aaKnown RBP7.18□□□□□ -1.26
TDP1-209ENST00000554180 POMPQ9Y244 141 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 CLDN16Q9Y5I7 305 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 SNX8Q9Y5X2 465 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 MAU2Q9Y6X3 613 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
TDP1-209ENST00000554180 A0A1W2PS29 197 aa7.17□□□□□ -1.26
TDP1-209ENST00000554180 WASHC1A8K0Z3 465 aa7.17□□□□□ -1.26
TDP1-209ENST00000554180 MEN1O00255 615 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms