RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SPNS1Q9H2V7 528 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 KCNJ16Q9NPI9 418 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 NECTIN3Q9NQS3 549 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 HPF1Q9NWY4 346 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 KCMF1Q9P0J7 381 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 NKX1-2Q9UD57 310 aaPredicted RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 RNF6Q9Y252 685 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 LRCH1Q9Y2L9 728 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 A0A088AWK7 358 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 IGKV3D-11A0A0A0MRZ8 115 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 A0A0G2JN53 185 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 MAGEA13PA6NCF6 341 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 TMEM114B3SHH9 223 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 NPIPA2E9PIF3 369 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 NPIPA3F8WFD2 350 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SLCO1B7G3V0H7 640 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 CLDN4O14493 209 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 PLIN3O60664 434 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ENTPD5O75356 428 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 NADKO95544 446 aaPredicted RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 IFNA16P05015 189 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ENO2P09104 434 aaPredicted RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 COL6A2P12110 1019 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 CPA3P15088 417 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 CD1EP15812 388 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ZNF10P21506 573 aaPredicted RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 TYK2P29597 1187 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SLC1A6P48664 564 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ART1P52961 327 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 PGGT1BP53609 377 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 STXBP1P61764 594 aaKnown RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 ASPHQ12797 758 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 BMPR2Q13873 1038 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 GSTA3Q16772 222 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 FAM45BPQ6NSW5 357 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SPNS3Q6ZMD2 512 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 KIAA0408Q6ZU52 694 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 FRA10AC1Q70Z53 315 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 MDGA2Q7Z553 956 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 THOC6Q86W42 341 aaKnown RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 ZNF227Q86WZ6 799 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 CCDC71Q8IV32 467 aaPredicted RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 CA13Q8N1Q1 262 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 MARVELD2Q8N4S9 558 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ANKRD53Q8N9V6 530 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 FAM47BQ8NA70 645 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 PSD4Q8NDX1 1056 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 OR52N2Q8NGI0 321 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 RDH11Q8TC12 318 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 FAM45AQ8TCE6 357 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 NCLNQ969V3 563 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ZNF570Q96NI8 536 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 UCK2Q9BZX2 261 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 KLHL31Q9H511 634 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 TRIM45Q9H8W5 580 aaPredicted RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 PELI2Q9HAT8 420 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 CLK4Q9HAZ1 481 aaKnown RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 PRTFDC1Q9NRG1 225 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SMYD2Q9NRG4 433 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 ZFATQ9P243 1243 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SLC17A6Q9P2U8 582 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 SLC22A14Q9Y267 594 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 MRPS33Q9Y291 106 aaKnown RBP8.22□□□□□ -1.09
TDP1-208ENST00000553989 MMACHCQ9Y4U1 282 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 KCNE2Q9Y6J6 123 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 PDZD2O15018 2839 aa8.22□□□□□ -1.09
TDP1-208ENST00000553989 GOLGA8QA0A0J9YX86 632 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 GOLGA8OA6NCC3 632 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 NPEPPSL1A6NEC2 478 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 GOLGA8NF8WBI6 632 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 G3V3Y1 287 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 SLC22A2O15244 555 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ERI3O43414 337 aaKnown RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 B3GALT2O43825 422 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-208ENST00000553989 ZFAND5O76080 213 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 AHSGP02765 367 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ALOX15P16050 662 aaPredicted RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 GABRB3P28472 473 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 PPP2R1BP30154 601 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 SERPINB8P50452 374 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ACTR3P61158 418 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ABCE1P61221 599 aaKnown RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 PPIAP62937 165 aaKnown RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 MXRA7P84157 204 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-208ENST00000553989 PMPCAQ10713 525 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 TESK1Q15569 626 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 TEDDM1Q5T9Z0 273 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 CES4AQ5XG92 561 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ZNF585AQ6P3V2 769 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 NXPE4Q6UWF7 544 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 IL20RBQ6UXL0 311 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ACAD11Q709F0 780 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 MYLK4Q86YV6 388 aaPredicted RBP8.21□□□□□ -1.1
TDP1-208ENST00000553989 KIRREL3Q8IZU9 778 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 RPRMLQ8N4K4 120 aa8.21□□□□□ -1.1
TDP1-208ENST00000553989 ZFP62Q8NB50 900 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms