RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MAPKAP1Q9BPZ7 522 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SORBS1Q9BX66 1292 aaKnown RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ALOXE3Q9BYJ1 711 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 AICDAQ9GZX7 198 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 DDX31Q9H8H2 851 aaKnown RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 MMP25Q9NPA2 562 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 KCNK9Q9NPC2 374 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 NECTIN3Q9NQS3 549 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 STMN3Q9NZ72 180 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 COPS7AQ9UBW8 275 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 EMCNQ9ULC0 261 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SEC16AO15027 2179 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 TRAV17A0A0B4J275 112 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 LOC100289279A0A1B0GTE1 492 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 GNG14A0A1W2PPG7 69 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 PRAMEF27A3QJZ7 478 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 K7EM74 188 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SLC28A1O00337 649 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 CYR61O00622 381 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 TM9SF1O15321 606 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 RGS14O43566 566 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 VPS4BO75351 444 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 ZFAND5O76080 213 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 TBX6O95947 436 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 UROSP10746 265 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 PIK3R1P27986 724 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 BSGP35613 385 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SERPINB5P36952 375 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 TRA2BP62995 288 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 TLE1Q04724 770 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF844Q08AG5 666 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 Q0VFX4 171 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF169Q14929 603 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 NADK2Q4G0N4 442 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 OR52E8Q6IFG1 317 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 VHLLQ6RSH7 139 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SH2D5Q6ZV89 423 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 NUDCD3Q8IVD9 361 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 LGI4Q8N135 537 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 FAM98AQ8NCA5 519 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 MORN4Q8NDC4 146 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 OR5L2Q8NGL0 311 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 OR14A16Q8NHC5 309 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 AGAP11Q8TF27 550 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 PKNOX2Q96KN3 472 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 C5orf34Q96MH7 638 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 ZIM3Q96PE6 472 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 CSF3RQ99062 836 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 UTP23Q9BRU9 249 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 MRPL1Q9BYD6 325 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 GSTO2Q9H4Y5 243 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 SSU72Q9NP77 194 aaKnown RBP7.79□□□□□ -1.16
PSEN1-209ENST00000553855 AGPAT4Q9NRZ5 378 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 GIMAP4Q9NUV9 329 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 KCMF1Q9P0J7 381 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 VPS4AQ9UN37 437 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 ACTL7BQ9Y614 415 aa7.79□□□□□ -1.16
PSEN1-209ENST00000553855 IGSF10Q6WRI0 2623 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 IGKV3D-11A0A0A0MRZ8 115 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 A0A0A6YYD5 115 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 TRBV11-1A0A0K0K1C0 115 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 C1orf226A1L170 272 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 OR5H15A6NDH6 313 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 C17orf105B2RV13 164 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PPP6CO00743 305 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 AZIN1O14977 448 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PROM1O43490 865 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PCDH7O60245 1069 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 NPHS1O60500 1241 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 LDB3O75112 727 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 EEDO75530 441 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ZWINTO95229 277 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ETHE1O95571 254 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 GPR75O95800 540 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 GBAP04062 536 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PGRP06401 933 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PLA2G2AP14555 144 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ALOX15P16050 662 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 DDX5P17844 614 aaKnown RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 GSTM5P46439 218 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 STT3AP46977 705 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ALDH9A1P49189 494 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 FOLH1Q04609 750 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 BTKQ06187 659 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 HEPACAMQ14CZ8 416 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 PCLAFQ15004 111 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 ACER2Q5QJU3 275 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 NDUFAF5Q5TEU4 345 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 HHATQ5VTY9 493 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 B3GNTL1Q67FW5 361 aaPredicted RBP7.78□□□□□ -1.16
PSEN1-209ENST00000553855 FAM180AQ6UWF9 173 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 LYPD4Q6UWN0 246 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 IGFL2Q6UWQ7 119 aa7.78□□□□□ -1.16
PSEN1-209ENST00000553855 HSDL2Q6YN16 418 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms