RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 IGHV1-45A0A0A0MS14 117 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 MYOCOSA0A1B0GUC4 107 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 FAM234BA2RU67 622 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 FCHO1O14526 889 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 SLC22A2O15244 555 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 PDPK1O15530 556 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 KIR3DL1P43629 444 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 PLIN5Q00G26 463 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 MLC1Q15049 377 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ELAVL1Q15717 326 aaKnown RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 SPRED3Q2MJR0 410 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 SFT2D3Q587I9 215 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 OR4F3Q6IEY1 312 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 RAB43Q86YS6 212 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 NATD1Q8N6N6 113 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 NFAM1Q8NET5 270 aaPredicted RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ZCCHC14Q8WYQ9 949 aaKnown RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 AMDHD1Q96NU7 426 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 PRPF18Q99633 342 aaKnown RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 PELOQ9BRX2 385 aaKnown RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 GLIPR2Q9H4G4 154 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ACSS1Q9NUB1 689 aaPredicted RBP16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ATAD3AQ9NVI7 634 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ENTPD4Q9Y227 616 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 ZNF780BQ9Y6R6 833 aa16.86■□□□□ 0.29
PSEN1-208ENST00000553719 IGHV3-20A0A0C4DH32 117 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 NKX2-8O15522 239 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 CCDC22O60826 627 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 PGRP06401 933 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 IFI6P09912 130 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 DDX5P17844 614 aaKnown RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ADSLP30566 484 aaPredicted RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 OTX2P32243 289 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 GPR143P51810 404 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 POLR2JP52435 117 aaKnown RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 DGKQP52824 942 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 OR4D2P58180 307 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 EEF1A2Q05639 463 aaKnown RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 PRICKLE4Q2TBC4 344 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ZNF628Q5EBL2 1059 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ATP1A1-AS1Q5TC04 95 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 MTDHQ86UE4 582 aaKnown RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 PSMA8Q8TAA3 256 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ZNF675Q8TD23 568 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 BCAS4Q8TDM0 211 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 PPWD1Q96BP3 646 aaKnown RBP16.85■□□□□ 0.29
PSEN1-208ENST00000553719 IMMP1LQ96LU5 166 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 IP6K3Q96PC2 410 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 DGAT2Q96PD7 388 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ZBTB18Q99592 522 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 CCDC106Q9BWC9 280 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 TRIM4Q9C037 500 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 CXorf21Q9HAI6 301 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 GIMAP4Q9NUV9 329 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 P4HTMQ9NXG6 502 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ERVK-11Q9UQG0 969 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 PTPRQQ9UMZ3 2332 aa16.85■□□□□ 0.29
PSEN1-208ENST00000553719 ASPDHA6ND91 283 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 SAGE2PA6NJ88 616 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 ZNF891A8MT65 544 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 RNASET2O00584 256 aaKnown RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 NDUFAB1O14561 156 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 RRP8O43159 456 aaKnown RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 IL6P05231 212 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 CT62P0C5K7 136 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 CAPN3P20807 821 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 NTSP30990 170 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 FOXK2Q01167 660 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 KLF10Q13118 480 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 LTB4RQ15722 352 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 PAPD4Q6PIY7 484 aaKnown RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 GK5Q6ZS86 529 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 CCDC116Q8IYX3 515 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 CCDC197Q8NCU1 140 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 OR14A16Q8NHC5 309 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 ZBED6CLQ96FA7 236 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 BBS4Q96RK4 519 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 SERHLQ9NQF3 203 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 FAM120CQ9NX05 1096 aaKnown RBP16.84■□□□□ 0.29
PSEN1-208ENST00000553719 MAT2BQ9NZL9 334 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 CCDC167Q9P0B6 97 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 ARMCX1Q9P291 453 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 ZNF639Q9UID6 485 aa16.84■□□□□ 0.29
PSEN1-208ENST00000553719 C17orf105B2RV13 164 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 DDAH2O95865 285 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 CLPSP04118 112 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 IGKV3-11P04433 115 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 S1PR1P21453 382 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 S100A3P33764 101 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 MPIP34949 423 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 PTGER1P34995 402 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 NCBP2P52298 156 aaKnown RBP eCLIP16.83■□□□□ 0.282e-8■■□□□ 11.9
PSEN1-208ENST00000553719 CDC20Q12834 499 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 MAP4K2Q12851 820 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 PGS1Q32NB8 556 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 TIGD2Q4W5G0 525 aa16.83■□□□□ 0.28
PSEN1-208ENST00000553719 AGKQ53H12 422 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms