RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ID2Q02363 134 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 SPRED3Q2MJR0 410 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 FAM174BQ3ZCQ3 159 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 AGKQ53H12 422 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ZNF385BQ569K4 471 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 SPANXN4Q5MJ08 99 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 C6orf163Q5TEZ5 329 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 FAM69BQ5VUD6 431 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ANKRD26P1Q6NSI1 321 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 BLOC1S3Q6QNY0 202 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 KIRREL2Q6UWL6 708 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 LANCL3Q6ZV70 420 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 NDUFAF7Q7L592 441 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 MRGPREQ86SM8 312 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 MTDHQ86UE4 582 aaKnown RBP18.09■□□□□ 0.49
PSEN1-207ENST00000553599 TMEM151BQ8IW70 566 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 KDF1Q8NAX2 398 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-207ENST00000553599 OR11G2Q8NGC1 345 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ZNF675Q8TD23 568 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ZCCHC14Q8WYQ9 949 aaKnown RBP18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ART5Q96L15 291 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 AMDHD1Q96NU7 426 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 TUBB6Q9BUF5 446 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 NMUR2Q9GZQ4 415 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 CLCA3PQ9Y6N3 262 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 ACACAQ13085 2346 aa18.09■□□□□ 0.49
PSEN1-207ENST00000553599 SCN2AQ99250 2005 aa18.08■□□□□ 0.49
PSEN1-207ENST00000553599 A0A087WV48 116 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 IGHV1-45A0A0A0MS14 117 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 PRSS51A0A1B0GVH4 220 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CFLARO15519 480 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 TNNI3P19429 210 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 ZFP36L2P47974 494 aaKnown RBP18.08■□□□□ 0.48
PSEN1-207ENST00000553599 NCBP2P52298 156 aaKnown RBP eCLIP18.08■□□□□ 0.482e-8■■□□□ 11.9
PSEN1-207ENST00000553599 MANFP55145 182 aaKnown RBP18.08■□□□□ 0.48
PSEN1-207ENST00000553599 MAPRE2Q15555 327 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 PRSS53Q2L4Q9 553 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 MPEG1Q2M385 716 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 FUNDC1Q8IVP5 155 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CCDC116Q8IYX3 515 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 MORN4Q8NDC4 146 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 OR9I1Q8NGQ6 314 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 SUN3Q8TAQ9 357 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 OR5P2Q8WZ92 322 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 RIT1Q92963 219 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 MYLK2Q9H1R3 596 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CXorf21Q9HAI6 301 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 PNO1Q9NRX1 252 aaKnown RBP18.08■□□□□ 0.48
PSEN1-207ENST00000553599 P4HTMQ9NXG6 502 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CCDC167Q9P0B6 97 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 PPIEQ9UNP9 301 aaKnown RBP18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CAPN7Q9Y6W3 813 aa18.08■□□□□ 0.48
PSEN1-207ENST00000553599 CROCCQ5TZA2 2017 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 A0A1W2PRB8 838 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 SAGE2PA6NJ88 616 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 C17orf105B2RV13 164 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 EFSO43281 561 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 HPP00738 406 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 COX6A1P12074 109 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 ICAM2P13598 275 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 AP2B1P63010 937 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 TLE3Q04726 772 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 MAP4K2Q12851 820 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 KLF10Q13118 480 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 PCOLCEQ15113 449 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 EXT1Q16394 746 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 OR4F3Q6IEY1 312 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 PAPD4Q6PIY7 484 aaKnown RBP18.07■□□□□ 0.48
PSEN1-207ENST00000553599 CCDC81Q6ZN84 652 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 GALNT12Q8IXK2 581 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 PTPMT1Q8WUK0 201 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-207ENST00000553599 CIDECQ96AQ7 238 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-207ENST00000553599 FER1L6-AS2Q96M78 137 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 LRRC37BQ96QE4 947 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 OR52E6Q96RD3 313 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 WDR77Q9BQA1 342 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-207ENST00000553599 GLIPR2Q9H4G4 154 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 RMND5AQ9H871 391 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 NEUROD4Q9HD90 331 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 BTNL2Q9UIR0 455 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 PCDHGB4Q9UN71 923 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 RAXQ9Y2V3 346 aa18.07■□□□□ 0.48
PSEN1-207ENST00000553599 NSG1A0A0A6YYJ2 146 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 CDC14CA4D256 554 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 SCN2BO60939 215 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 NT5EP21589 574 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 WNT3P56703 355 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 EEF1A2Q05639 463 aaKnown RBP18.06■□□□□ 0.48
PSEN1-207ENST00000553599 CDC20Q12834 499 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 UBAP2LQ14157 1087 aaKnown RBP18.06■□□□□ 0.48
PSEN1-207ENST00000553599 ZNF750Q32MQ0 723 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 PSMA8Q8TAA3 256 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 PPWD1Q96BP3 646 aaKnown RBP18.06■□□□□ 0.48
PSEN1-207ENST00000553599 C8orf44Q96CB5 159 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 CTHRC1Q96CG8 243 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 SPDL1Q96EA4 605 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 FBXL20Q96IG2 436 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 CCDC115Q96NT0 180 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 DCBLD2Q96PD2 775 aa18.06■□□□□ 0.48
PSEN1-207ENST00000553599 SLC25A23Q9BV35 468 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms