RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 HBQ1P09105 142 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 CCL4P13236 92 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 FBLP22087 321 aaKnown RBP12.91□□□□□ -0.34
APEX1-205ENST00000553555 IL10P22301 178 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 CHI3L1P36222 383 aaPredicted RBP12.91□□□□□ -0.34
APEX1-205ENST00000553555 CCT3P49368 545 aaKnown RBP12.91□□□□□ -0.34
APEX1-205ENST00000553555 CCNIQ14094 377 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 FLOT2Q14254 428 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 RGNQ15493 299 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 SAXO2Q658L1 398 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 TMEM64Q6YI46 380 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 SLC38A9Q8NBW4 561 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 OR2T12Q8NG77 320 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
APEX1-205ENST00000553555 ELP4Q96EB1 424 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 NEURL3Q96EH8 262 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 YIPF2Q9BWQ6 316 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 LANCL2Q9NS86 450 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 EGFL7Q9UHF1 273 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
APEX1-205ENST00000553555 FAM186AA6NE01 2351 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 SPEGQ15772 3267 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 MYOCOSA0A1B0GUC4 107 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 FAM220BPB1ANY3 271 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 B4E171 279 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 JRKO75564 520 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 KCNK5O95279 499 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 PTGER1P34995 402 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 TSPAN7P41732 249 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 HSD17B7P56937 341 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 BTG2P78543 158 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
APEX1-205ENST00000553555 VAC14Q08AM6 782 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 SLC13A2Q13183 592 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 RIPK1Q13546 671 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 LTB4RQ15722 352 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 SPDYE7PQ495Y7 208 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-205ENST00000553555 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-205ENST00000553555 CPZQ66K79 652 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 C6orf120Q7Z4R8 191 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 DHFR2Q86XF0 187 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 OR52N2Q8NGI0 321 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 OR9A2Q8NGT5 310 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 CLIP3Q96DZ5 547 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 CTRCQ99895 268 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 STRADBQ9C0K7 418 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 CHST8Q9H2A9 424 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 MUC13Q9H3R2 512 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 RAD21L1Q9H4I0 556 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
APEX1-205ENST00000553555 ACTR3BQ9P1U1 418 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 TRPC4Q9UBN4 977 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
APEX1-205ENST00000553555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.89□□□□□ -0.35
APEX1-205ENST00000553555 ELOVL7A1L3X0 281 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 TGFBR3LH3BV60 316 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 EMC8O43402 210 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
APEX1-205ENST00000553555 BMP10O95393 424 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 ONECUT2O95948 504 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 MT-CO3P00414 261 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 ATP1B1P05026 303 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 SLC35E2P0CK97 266 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 SOX11P35716 441 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 LIMK1P53667 647 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 FADDQ13158 208 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 COX20Q5RI15 118 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 ARHGAP40Q5TG30 622 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 TMEM107Q6UX40 140 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 RNF130Q86XS8 419 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 MICU2Q8IYU8 434 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 ADCY4Q8NFM4 1077 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 KAT2AQ92830 837 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 MOAP1Q96BY2 351 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 RNF31Q96EP0 1072 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 REXO5Q96IC2 774 aaKnown RBP12.89□□□□□ -0.35
APEX1-205ENST00000553555 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
APEX1-205ENST00000553555 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 C3orf14Q9HBI5 128 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
APEX1-205ENST00000553555 SLC22A11Q9NSA0 550 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 MMACHCQ9Y4U1 282 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 CLDN16Q9Y5I7 305 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 SNX13Q9Y5W8 968 aa12.89□□□□□ -0.35
APEX1-205ENST00000553555 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 PLOD2O00469 737 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 ARPC2O15144 300 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 TNFRSF21O75509 655 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 STAMBPO95630 424 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
APEX1-205ENST00000553555 CDK4P11802 303 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms